Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026928070.1 |
| length | 942 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 1 |
| gene id | or134-1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 6636608 ~ 6637549 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU27000 | lncRNA | upstream | 13159 | 6623243 ~ 6623449 (+) | True | G22673 |
| TU26932 | lncRNA | upstream | 78607 | 6557791 ~ 6558001 (+) | True | G22621 |
| TU26895 | lncRNA | upstream | 135157 | 6501220 ~ 6501451 (+) | True | G22598 |
| TU26889 | lncRNA | upstream | 153460 | 6481972 ~ 6483148 (+) | True | G22592 |
| TU26879 | lncRNA | upstream | 174357 | 6458924 ~ 6462251 (+) | True | G22582 |
| TU27010 | lncRNA | downstream | 13556 | 6651105 ~ 6651393 (+) | True | G22683 |
| TU27093 | lncRNA | downstream | 162527 | 6800076 ~ 6800790 (+) | True | G22765 |
| TU27263 | lncRNA | downstream | 406026 | 7043575 ~ 7043782 (+) | True | G22931 |
| TU27455 | lncRNA | downstream | 688814 | 7326363 ~ 7370530 (+) | True | G23115 |
| XR_004579836.1 | lncRNA | downstream | 703760 | 7341309 ~ 7343059 (+) | True | LOC117599372 |
| XM_034314777.1 | mRNA | upstream | 14928 | 6599357 ~ 6621680 (+) | True | matn4 |
| XM_026921117.2 | mRNA | upstream | 14928 | 6599357 ~ 6621680 (+) | False | matn4 |
| XM_034314773.1 | mRNA | upstream | 14928 | 6599357 ~ 6621680 (+) | False | matn4 |
| XM_026921099.2 | mRNA | upstream | 14928 | 6599357 ~ 6621680 (+) | False | matn4 |
| XM_026915872.2 | mRNA | upstream | 331439 | 6247776 ~ 6305169 (+) | True | esyt1b |
| XM_026914353.2 | mRNA | downstream | 1534 | 6639083 ~ 6640030 (+) | True | LOC113526908 |
| XM_026914339.1 | mRNA | downstream | 16433 | 6653982 ~ 6654911 (+) | True | LOC113526899 |
| XM_026914327.2 | mRNA | downstream | 29389 | 6666938 ~ 6667705 (+) | True | LOC113526892 |
| XM_034299610.1 | mRNA | downstream | 35703 | 6673252 ~ 6674193 (+) | True | LOC117596064 |
| XM_034299923.1 | mRNA | downstream | 43462 | 6681011 ~ 6682780 (+) | True | LOC113526885 |
| XR_003402786.2 | other | upstream | 883504 | 5717530 ~ 5753104 (+) | False | rbl1 |
| TU26124 | other | upstream | 1427744 | 5208346 ~ 5208864 (+) | True | G21901 |
| TU26030 | other | upstream | 1548030 | 5088134 ~ 5088578 (+) | True | G21835 |
| XR_004579614.1 | other | upstream | 1876963 | 4754266 ~ 4759645 (+) | True | spega |
| XR_003404681.1 | other | upstream | 1976485 | 4660009 ~ 4660123 (+) | True | LOC113545978 |
| TU28587 | other | downstream | 2813376 | 9450925 ~ 9454462 (+) | False | hmga1b |
| TU28588 | other | downstream | 2813376 | 9450925 ~ 9454462 (+) | True | hmga1b |
| XR_004577034.1 | other | downstream | 2954392 | 9591941 ~ 9596854 (+) | False | LOC113532547 |
| TU28879 | other | downstream | 3257696 | 9895245 ~ 9907171 (+) | False | LOC113530691 |
| TU29055 | other | downstream | 3560417 | 10197966 ~ 10198455 (+) | True | G24500 |
