Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026933019.2 |
| length | 1426 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 5 |
| gene id | rgs4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 23836334 ~ 23839590 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0043547 | positive regulation of GTPase activity | biological_process |
| GO:0031018 | endocrine pancreas development | biological_process |
| GO:0007626 | locomotory behavior | biological_process |
| GO:0007409 | axonogenesis | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005096 | GTPase activator activity | molecular_function |
| id | description |
|---|---|
| K16449 | RGS; regulator of G-protein signaling |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU38351 | lncRNA | upstream | 169401 | 23662954 ~ 23666933 (+) | True | LOC113538279 |
| XR_003403831.2 | lncRNA | upstream | 169834 | 23663008 ~ 23666500 (+) | False | LOC113538279 |
| XR_003403832.2 | lncRNA | upstream | 169834 | 23663008 ~ 23666500 (+) | False | LOC113538279 |
| TU38347 | lncRNA | upstream | 182854 | 23650634 ~ 23653480 (+) | False | uhmk1 |
| TU38343 | lncRNA | upstream | 221269 | 23614863 ~ 23615065 (+) | True | G32502 |
| TU38526 | lncRNA | downstream | 104649 | 23944239 ~ 23944460 (+) | True | G32662 |
| TU38656 | lncRNA | downstream | 420403 | 24259993 ~ 24260377 (+) | True | G32782 |
| TU38672 | lncRNA | downstream | 494609 | 24334199 ~ 24334455 (+) | True | G32795 |
| XR_004577268.1 | lncRNA | downstream | 809428 | 24649018 ~ 24650283 (+) | True | LOC117596090 |
| TU38761 | lncRNA | downstream | 814799 | 24654389 ~ 24656248 (+) | False | LOC117598985 |
| XM_026933151.2 | mRNA | upstream | 182779 | 23633606 ~ 23653555 (+) | True | uhmk1 |
| XM_026933126.2 | mRNA | upstream | 284390 | 23533178 ~ 23551944 (+) | True | il12rb2 |
| XM_026933594.2 | mRNA | upstream | 305950 | 23509898 ~ 23530384 (+) | False | il23r |
| XM_026933496.2 | mRNA | downstream | 719343 | 24558933 ~ 24567675 (+) | True | LOC113538433 |
| XM_034311017.1 | mRNA | downstream | 728985 | 24568575 ~ 24570619 (+) | True | LOC113538193 |
| XM_026933575.2 | mRNA | downstream | 736091 | 24575681 ~ 24588531 (+) | True | rtn4a |
| XM_034310175.1 | mRNA | downstream | 813403 | 24652993 ~ 24656218 (+) | True | LOC117598985 |
| XM_026933073.2 | mRNA | downstream | 1917224 | 25756814 ~ 25784890 (+) | True | trak2 |
| trnaf-gaa_16 | other | upstream | 360311 | 23475951 ~ 23476023 (+) | True | trnaf-gaa_16 |
| XR_004579462.1 | other | upstream | 1233996 | 22598341 ~ 22602338 (+) | False | tmem69 |
| TU36319 | other | upstream | 2818887 | 21014858 ~ 21017447 (+) | False | insl5a |
| XR_003403752.1 | other | upstream | 3726109 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
| TU35395 | other | upstream | 4299320 | 19534441 ~ 19537014 (+) | False | smx5 |
| TU38551 | other | downstream | 180788 | 24020378 ~ 24021036 (+) | True | G32684 |
| TU38758 | other | downstream | 813400 | 24652990 ~ 24653965 (+) | False | LOC117598985 |
| TU38760 | other | downstream | 813595 | 24653185 ~ 24653965 (+) | False | LOC117598985 |
| XR_003403845.2 | other | downstream | 2774060 | 26613650 ~ 26629851 (+) | False | st6gal2b |
| TU39837 | other | downstream | 2791004 | 26630594 ~ 26648369 (+) | False | st6gal2b |
