Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026938572.2 |
| length | 1005 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 4 |
| gene id | tspo |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 16391412 ~ 16394007 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0060319 | primitive erythrocyte differentiation | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33501 | lncRNA | upstream | 30068 | 16358082 ~ 16361347 (+) | True | G28410 |
| TU33493 | lncRNA | upstream | 45329 | 16345645 ~ 16346086 (+) | True | G28405 |
| TU33492 | lncRNA | upstream | 54721 | 16336192 ~ 16336694 (+) | True | G28404 |
| TU33490 | lncRNA | upstream | 56763 | 16333451 ~ 16334652 (+) | True | G28402 |
| TU33449 | lncRNA | upstream | 121863 | 16268709 ~ 16269552 (+) | True | G28361 |
| TU33523 | lncRNA | downstream | 4238 | 16398245 ~ 16401066 (+) | True | tomm6 |
| TU33518 | lncRNA | downstream | 4423 | 16398430 ~ 16401066 (+) | False | tomm6 |
| TU33519 | lncRNA | downstream | 4423 | 16398430 ~ 16401066 (+) | False | tomm6 |
| TU33520 | lncRNA | downstream | 4423 | 16398430 ~ 16401111 (+) | False | tomm6 |
| TU33525 | lncRNA | downstream | 4423 | 16398430 ~ 16401111 (+) | False | tomm6 |
| XM_026924529.2 | mRNA | upstream | 25478 | 16363671 ~ 16365937 (+) | True | ppil1 |
| XM_026915498.2 | mRNA | upstream | 63263 | 16321000 ~ 16328152 (+) | True | si:ch211-157b11.14 |
| XM_026915510.2 | mRNA | upstream | 70843 | 16317108 ~ 16320572 (+) | True | LOC113527565 |
| XM_034310280.1 | mRNA | upstream | 78171 | 16306103 ~ 16313244 (+) | False | c2h1orf159 |
| XM_026938693.2 | mRNA | downstream | 4402 | 16398409 ~ 16401099 (+) | False | tomm6 |
| XM_026943326.2 | mRNA | downstream | 66394 | 16460401 ~ 16463536 (+) | True | LOC113544464 |
| XM_026926533.2 | mRNA | downstream | 70936 | 16464943 ~ 16475146 (+) | True | lrrc41 |
| XM_026913984.2 | mRNA | downstream | 660125 | 17054132 ~ 17066099 (+) | True | hyi |
| XM_034298932.1 | mRNA | downstream | 785236 | 17179243 ~ 17184683 (+) | True | LOC117595909 |
| TU33403 | other | upstream | 209112 | 16181318 ~ 16182303 (+) | False | mustn1a |
| XR_004580083.1 | other | upstream | 1097061 | 15278827 ~ 15294354 (+) | False | fancd2 |
| trnaf-gaa_15 | other | upstream | 1199759 | 15191584 ~ 15191656 (+) | True | trnaf-gaa_15 |
| XR_004577012.1 | other | upstream | 2890119 | 13498298 ~ 13501296 (+) | False | tshba |
| XR_004577013.1 | other | upstream | 2892050 | 13496154 ~ 13499365 (+) | False | tshba |
| TU34871 | other | downstream | 2380763 | 18774770 ~ 18826920 (+) | False | G29569 |
| trnai-aau | other | downstream | 2423395 | 18817402 ~ 18817475 (+) | True | trnai-aau |
| TU35395 | other | downstream | 3140434 | 19534441 ~ 19537014 (+) | False | smx5 |
| XR_003403752.1 | other | downstream | 3716123 | 20110130 ~ 20110225 (+) | True | LOC113537321 |
| TU36319 | other | downstream | 4620851 | 21014858 ~ 21017447 (+) | False | insl5a |
