Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026945646.2 |
| length | 1253 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 14 |
| gene id | LOC113545959 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 4475852 ~ 4483914 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko00260 | Glycine, serine and threonine metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU25724 | lncRNA | downstream | 13836 | 4460931 ~ 4462016 (-) | True | G21557 |
| TU25722 | lncRNA | downstream | 25074 | 4450462 ~ 4450778 (-) | True | G21555 |
| TU25721 | lncRNA | downstream | 29637 | 4445803 ~ 4446215 (-) | True | G21554 |
| TU25719 | lncRNA | downstream | 32402 | 4442856 ~ 4443450 (-) | True | G21552 |
| TU25710 | lncRNA | downstream | 46511 | 4427193 ~ 4429341 (-) | True | G21546 |
| TU25760 | lncRNA | upstream | 56313 | 4540227 ~ 4546709 (-) | False | G21592 |
| TU25761 | lncRNA | upstream | 56313 | 4540227 ~ 4546709 (-) | True | G21592 |
| XR_003404663.2 | lncRNA | upstream | 66657 | 4550571 ~ 4569672 (-) | True | LOC113545826 |
| TU25866 | lncRNA | upstream | 215910 | 4699824 ~ 4700057 (-) | True | G21693 |
| XR_004579646.1 | lncRNA | upstream | 279995 | 4763909 ~ 4765538 (-) | True | LOC113545947 |
| XM_026945430.2 | mRNA | downstream | 110681 | 4359120 ~ 4365171 (-) | True | prelid3b |
| XM_034310026.1 | mRNA | downstream | 110724 | 4359120 ~ 4365128 (-) | False | prelid3b |
| XM_026945639.2 | mRNA | downstream | 436568 | 4034071 ~ 4039284 (-) | True | cldn10a |
| XM_026945452.2 | mRNA | downstream | 449874 | 4023790 ~ 4025978 (-) | True | si:busm1-52i16.2 |
| XM_026945608.2 | mRNA | downstream | 467275 | 4004622 ~ 4008577 (-) | False | si:ch211-181l5.2 |
| XM_026945449.2 | mRNA | upstream | 106470 | 4590384 ~ 4618467 (-) | True | igfbp2a |
| XM_026945422.2 | mRNA | upstream | 233496 | 4717410 ~ 4719627 (-) | True | inha |
| XM_026945530.2 | mRNA | upstream | 329816 | 4813730 ~ 4902011 (-) | False | obsl1a |
| XM_026945531.2 | mRNA | upstream | 329816 | 4813730 ~ 4901992 (-) | True | obsl1a |
| XM_026945532.2 | mRNA | upstream | 329816 | 4813730 ~ 4883412 (-) | False | obsl1a |
| XR_004577458.1 | other | downstream | 17405 | 4458336 ~ 4458447 (-) | True | LOC117596286 |
| XR_004577457.1 | other | downstream | 28373 | 4447367 ~ 4447479 (-) | True | LOC117596284 |
| trnaf-gaa_14 | other | downstream | 143681 | 4332099 ~ 4332171 (-) | True | trnaf-gaa_14 |
| TU25557 | other | downstream | 218765 | 4256668 ~ 4257087 (-) | True | G21434 |
| XR_004579840.1 | other | downstream | 697864 | 3750018 ~ 3777988 (-) | True | rab22a |
| XR_003404665.2 | other | upstream | 329361 | 4813275 ~ 4902011 (-) | False | obsl1a |
| XR_003404666.2 | other | upstream | 337423 | 4821337 ~ 4902011 (-) | False | obsl1a |
| XR_004579842.1 | other | upstream | 337444 | 4821358 ~ 4902011 (-) | False | obsl1a |
| XR_003404667.2 | other | upstream | 337465 | 4821379 ~ 4902011 (-) | False | obsl1a |
| XR_003403147.2 | other | upstream | 627548 | 5111462 ~ 5201212 (-) | False | LOC113530384 |
