Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnaf-gaa_14 |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | trnaf-gaa_14 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 4332099 ~ 4332171 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU25564 | lncRNA | downstream | 60070 | 4271809 ~ 4272029 (-) | True | G21441 |
| TU25540 | lncRNA | downstream | 76737 | 4245757 ~ 4255362 (-) | True | LOC113545816 |
| XR_003404661.2 | lncRNA | downstream | 76907 | 4249442 ~ 4255192 (-) | False | LOC113545816 |
| XR_004579507.1 | lncRNA | downstream | 76908 | 4249442 ~ 4255191 (-) | False | LOC113545816 |
| XR_003404659.2 | lncRNA | downstream | 76915 | 4249442 ~ 4255184 (-) | False | LOC113545816 |
| TU25634 | lncRNA | upstream | 21928 | 4354099 ~ 4354315 (-) | True | G21486 |
| TU25710 | lncRNA | upstream | 95022 | 4427193 ~ 4429341 (-) | True | G21546 |
| TU25719 | lncRNA | upstream | 110685 | 4442856 ~ 4443450 (-) | True | G21552 |
| TU25721 | lncRNA | upstream | 113632 | 4445803 ~ 4446215 (-) | True | G21554 |
| TU25722 | lncRNA | upstream | 118291 | 4450462 ~ 4450778 (-) | True | G21555 |
| XM_026945639.2 | mRNA | downstream | 292815 | 4034071 ~ 4039284 (-) | True | cldn10a |
| XM_026945452.2 | mRNA | downstream | 306121 | 4023790 ~ 4025978 (-) | True | si:busm1-52i16.2 |
| XM_026945608.2 | mRNA | downstream | 323522 | 4004622 ~ 4008577 (-) | False | si:ch211-181l5.2 |
| XM_026945607.2 | mRNA | downstream | 323522 | 4004622 ~ 4008577 (-) | True | si:ch211-181l5.2 |
| XM_034314254.1 | mRNA | downstream | 373281 | 3938000 ~ 3958818 (-) | False | stx16 |
| XM_026945430.2 | mRNA | upstream | 26949 | 4359120 ~ 4365171 (-) | True | prelid3b |
| XM_034310026.1 | mRNA | upstream | 26949 | 4359120 ~ 4365128 (-) | False | prelid3b |
| XM_026945646.2 | mRNA | upstream | 143681 | 4475852 ~ 4483914 (-) | True | LOC113545959 |
| XM_026945449.2 | mRNA | upstream | 258213 | 4590384 ~ 4618467 (-) | True | igfbp2a |
| XM_026945422.2 | mRNA | upstream | 385239 | 4717410 ~ 4719627 (-) | True | inha |
| TU25557 | other | downstream | 75012 | 4256668 ~ 4257087 (-) | True | G21434 |
| XR_004579840.1 | other | downstream | 554111 | 3750018 ~ 3777988 (-) | True | rab22a |
| XR_004580246.1 | other | downstream | 595213 | 3717715 ~ 3736886 (-) | False | npepl1 |
| trnaf-gaa_13 | other | downstream | 1294743 | 3037284 ~ 3037356 (-) | True | trnaf-gaa_13 |
| TU24006 | other | downstream | 2509537 | 1812759 ~ 1822562 (-) | False | slc9a7 |
| XR_004577457.1 | other | upstream | 115196 | 4447367 ~ 4447479 (-) | True | LOC117596284 |
| XR_004577458.1 | other | upstream | 126165 | 4458336 ~ 4458447 (-) | True | LOC117596286 |
| XR_003404665.2 | other | upstream | 481104 | 4813275 ~ 4902011 (-) | False | obsl1a |
| XR_003404666.2 | other | upstream | 489166 | 4821337 ~ 4902011 (-) | False | obsl1a |
| XR_004579842.1 | other | upstream | 489187 | 4821358 ~ 4902011 (-) | False | obsl1a |
