Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU258460 |
| length | 219 |
| lncRNA type | intronic |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G218208 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 847396 ~ 847640 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU258419 | lncRNA | downstream | 105553 | 731362 ~ 741843 (-) | True | G218184 |
| TU258428 | lncRNA | downstream | 107398 | 734370 ~ 739998 (-) | True | G218188 |
| TU258426 | lncRNA | downstream | 109178 | 733617 ~ 738218 (-) | True | G218187 |
| TU258423 | lncRNA | downstream | 110503 | 731516 ~ 736893 (-) | True | G218185 |
| TU258424 | lncRNA | downstream | 110503 | 731918 ~ 736893 (-) | False | G218185 |
| TU258486 | lncRNA | upstream | 107871 | 955511 ~ 1009502 (-) | False | mecom |
| TU258540 | lncRNA | upstream | 245151 | 1092791 ~ 1093179 (-) | True | G218268 |
| XR_004579531.1 | lncRNA | upstream | 275789 | 1123429 ~ 1127973 (-) | True | LOC117599090 |
| TU258584 | lncRNA | upstream | 313073 | 1160713 ~ 1161109 (-) | True | G218306 |
| TU258603 | lncRNA | upstream | 370591 | 1218231 ~ 1227815 (-) | True | G218324 |
| XM_026943578.2 | mRNA | downstream | 28734 | 810898 ~ 818662 (-) | False | si:dkey-260j18.2 |
| XM_026943579.2 | mRNA | downstream | 28734 | 810898 ~ 818662 (-) | True | si:dkey-260j18.2 |
| XM_026943580.2 | mRNA | downstream | 39470 | 794925 ~ 807926 (-) | True | slc5a2 |
| XM_026943289.2 | mRNA | downstream | 61222 | 772966 ~ 786174 (-) | True | coq8b |
| XM_034310820.1 | mRNA | downstream | 100139 | 712895 ~ 747257 (-) | True | numbl |
| XM_026943423.2 | mRNA | upstream | 9698 | 857338 ~ 861595 (-) | True | mrpl44 |
| XM_034310906.1 | mRNA | upstream | 16050 | 863690 ~ 876945 (-) | False | mffa |
| XM_034310905.1 | mRNA | upstream | 16050 | 863690 ~ 876945 (-) | False | mffa |
| XM_034310904.1 | mRNA | upstream | 16050 | 863690 ~ 876945 (-) | False | mffa |
| XM_034310903.1 | mRNA | upstream | 16050 | 863690 ~ 876945 (-) | True | mffa |
| TU258381 | other | downstream | 163041 | 654112 ~ 684355 (-) | False | dpf1 |
| trnae-cuc_27 | other | downstream | 615585 | 231740 ~ 231811 (-) | True | trnae-cuc_27 |
| TU258469 | other | upstream | 31132 | 878772 ~ 879183 (-) | True | G218214 |
| TU258537 | other | upstream | 232648 | 1080288 ~ 1134018 (-) | True | G218265 |
| TU258580 | other | upstream | 306770 | 1154410 ~ 1154700 (-) | True | G218302 |
| trnag-ucc_16 | other | upstream | 648122 | 1495762 ~ 1495833 (-) | True | trnag-ucc_16 |
| trnag-ucc_17 | other | upstream | 649396 | 1497036 ~ 1497106 (-) | False | trnag-ucc_17 |
