Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU260070 |
| length | 165 |
| lncRNA type | sense_over |
| GC content | 0.27 |
| exon number | 1 |
| gene id | gal3st2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 2612857 ~ 2629901 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU260069 | lncRNA | downstream | 1160 | 2611394 ~ 2612161 (-) | True | G219576 |
| TU259360 | lncRNA | downstream | 193830 | 2336752 ~ 2419491 (-) | False | G218917 |
| TU259361 | lncRNA | downstream | 193830 | 2336752 ~ 2419491 (-) | True | G218917 |
| TU259362 | lncRNA | downstream | 193830 | 2336752 ~ 2419491 (-) | False | G218917 |
| TU259357 | lncRNA | downstream | 323462 | 2281401 ~ 2289859 (-) | True | scaf4b |
| TU260087 | lncRNA | upstream | 71604 | 2685089 ~ 2685930 (-) | True | G219593 |
| TU260111 | lncRNA | upstream | 184708 | 2798193 ~ 2798951 (-) | True | G219609 |
| TU260112 | lncRNA | upstream | 184825 | 2798310 ~ 2798951 (-) | False | G219609 |
| XR_003404527.2 | lncRNA | upstream | 219215 | 2832700 ~ 2838911 (-) | False | LOC113544648 |
| TU260101 | lncRNA | upstream | 219227 | 2832712 ~ 2839242 (-) | True | LOC113544648 |
| XM_034310788.1 | mRNA | downstream | 86562 | 2407619 ~ 2526759 (-) | True | fat3a |
| XM_026943328.2 | mRNA | downstream | 218674 | 2374789 ~ 2394647 (-) | True | mtnr1ba |
| XM_026943287.2 | mRNA | downstream | 292406 | 2287613 ~ 2320915 (-) | False | scaf4b |
| XM_026943513.2 | mRNA | upstream | 55965 | 2669450 ~ 2677124 (-) | True | efhd1 |
| XM_026943607.2 | mRNA | upstream | 73062 | 2686547 ~ 2697524 (-) | True | zmp:0000000529 |
| XM_026943520.2 | mRNA | upstream | 84909 | 2698394 ~ 2741147 (-) | True | LOC113544616 |
| XM_026943494.2 | mRNA | upstream | 158957 | 2772442 ~ 2778203 (-) | True | psma6l |
| XM_026943345.2 | mRNA | upstream | 174287 | 2787772 ~ 2794518 (-) | True | LOC113544504 |
| trnag-ucc_22 | other | downstream | 643838 | 1969412 ~ 1969483 (-) | True | trnag-ucc_22 |
| trnag-ucc_18 | other | downstream | 1115910 | 1497340 ~ 1497411 (-) | True | trnag-ucc_18 |
| trnag-ucc_17 | other | downstream | 1116215 | 1497036 ~ 1497106 (-) | False | trnag-ucc_17 |
| trnag-ucc_16 | other | downstream | 1117488 | 1495762 ~ 1495833 (-) | True | trnag-ucc_16 |
| TU258580 | other | downstream | 1458621 | 1154410 ~ 1154700 (-) | True | G218302 |
| TU260071 | other | upstream | 2741 | 2616226 ~ 2629866 (-) | False | gal3st2 |
| trnag-ucc_24 | other | upstream | 65609 | 2679094 ~ 2679165 (-) | True | trnag-ucc_24 |
| trnaw-cca_13 | other | upstream | 69921 | 2683406 ~ 2683477 (-) | True | trnaw-cca_13 |
| TU260166 | other | upstream | 274422 | 2887907 ~ 2963350 (-) | True | G219642 |
| TU260175 | other | upstream | 293841 | 2907326 ~ 2911165 (-) | True | G219651 |
