Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU261315 |
| length | 825 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | G220690 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 4875644 ~ 4883440 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU261237 | lncRNA | downstream | 259012 | 4616282 ~ 4616632 (-) | True | G220621 |
| TU260949 | lncRNA | downstream | 286091 | 4589344 ~ 4589553 (-) | True | G220362 |
| TU260946 | lncRNA | downstream | 311516 | 4563720 ~ 4564128 (-) | True | G220359 |
| TU260838 | lncRNA | downstream | 483408 | 4389272 ~ 4392236 (-) | True | G220267 |
| TU260836 | lncRNA | downstream | 558023 | 4314866 ~ 4317621 (-) | True | G220266 |
| TU261318 | lncRNA | upstream | 4466 | 4887906 ~ 4888446 (-) | True | G220693 |
| TU261319 | lncRNA | upstream | 5424 | 4888864 ~ 4889213 (-) | True | G220694 |
| XR_004579501.1 | lncRNA | upstream | 19183 | 4902623 ~ 4905297 (-) | False | LOC117599069 |
| XR_004579500.1 | lncRNA | upstream | 19183 | 4902623 ~ 4905297 (-) | True | LOC117599069 |
| TU261338 | lncRNA | upstream | 65104 | 4948544 ~ 4995694 (-) | True | G220705 |
| XM_026943406.2 | mRNA | downstream | 17237 | 4685721 ~ 4858407 (-) | True | LOC113544562 |
| XM_034310565.1 | mRNA | downstream | 17600 | 4685722 ~ 4858044 (-) | False | LOC113544562 |
| XM_026943409.2 | mRNA | downstream | 61813 | 4685722 ~ 4813831 (-) | False | LOC113544562 |
| XM_026943411.2 | mRNA | downstream | 61850 | 4685722 ~ 4813794 (-) | False | LOC113544562 |
| XM_026943408.2 | mRNA | downstream | 64925 | 4685722 ~ 4810719 (-) | False | LOC113544562 |
| XM_026943554.2 | mRNA | upstream | 14510 | 4897950 ~ 4971519 (-) | False | LOC113544632 |
| XM_026943556.2 | mRNA | upstream | 14510 | 4897950 ~ 4971519 (-) | False | LOC113544632 |
| XM_026943555.2 | mRNA | upstream | 14510 | 4897950 ~ 4971519 (-) | False | LOC113544632 |
| XM_026943553.2 | mRNA | upstream | 14510 | 4897950 ~ 4971519 (-) | False | LOC113544632 |
| XM_026943549.2 | mRNA | upstream | 14510 | 4897950 ~ 4971519 (-) | False | LOC113544632 |
| TU260468 | other | downstream | 1058857 | 3740282 ~ 3816787 (-) | False | LOC113544484 |
| TU260466 | other | downstream | 1058857 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260467 | other | downstream | 1058857 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260175 | other | downstream | 1964479 | 2907326 ~ 2911165 (-) | True | G219651 |
| TU261666 | other | upstream | 826658 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU261738 | other | upstream | 914545 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261846 | other | upstream | 1137780 | 6021220 ~ 6024311 (-) | False | dynll2a |
| trnap-cgg_8 | other | upstream | 2312083 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 2508975 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
