RNA id: TCONS_00007929


Basic Information

Item Value
RNA id TCONS_00007929
length 660
RNA type mRNA
GC content 0.50
exon number 3
gene id XLOC_004151
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 25528557 ~ 25539323 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGACTGTGATCATGAGGATGAACATGGTGGCCGCTCACTGACTGGATCAGAATCTAGCTTTCGTGAAGATGAAGCACAAATTAATTCAGCTCTTGCTATATCCACTTTTCAGCACTCTGACGTGCGTATAAAAGAAGTTCCAGCAGATGTGAAAACGGCATTTCAGGATGATCTAAACCCTCCTGTGAGCAACATCAGCGATGCCTTTCCTGTCTGTGTTCAACTGCCTGCAAACCATCTTAAAAATATGGCCACTTATAAAACAACACACCGTCATCGCAAAATCAGCCATTGTTCCTCCTCCACCATCAGAAGTGGAATGAGCCTGAGAGCCCCTGTAGAAGATCTGTGCGCGTCCGTCCTGTTGGCGTGTCTGTTCTGCAGATTTTGGGACTGCGTGCTGGCGTTGGGTGACGGGTGTCAGTTCTGCGTGGCGTCTCTATGTTCCTCCTTCTGCTCGAGCATGTGCTGCTGCGATCCTTCCTCTCTGGAGGAACTGATAGATTTGTGTCCGTGCTGCAGTTGTGCTGAATATGTTGAGGCGTGCGGCTGCAGCTGTGGAGAAAACACCTTCGACTGCTCCATCTGCGACCTGTGTCTGCAGACCAGCGAGTGTCTGGAGCTCGGCATGGAACTCTCGCAGCTGCTGTTTCACTAG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131126-30 No description available

Ensembl:

ensembl_id ENSDART00000171560

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008798 lncRNA downstream 52068 25475305 ~ 25476980 (-) False XLOC_004150
TCONS_00007926 lncRNA downstream 52068 25475305 ~ 25476980 (-) False XLOC_004150
TCONS_00008797 lncRNA downstream 52466 25475305 ~ 25476582 (-) False XLOC_004150
TCONS_00007924 lncRNA downstream 115895 25412343 ~ 25413153 (-) True XLOC_004148
TCONS_00007921 lncRNA downstream 120152 25368112 ~ 25408896 (-) False XLOC_004147
TCONS_00008799 lncRNA upstream 1081093 26619434 ~ 26666495 (-) False XLOC_004162
TCONS_00007965 lncRNA upstream 1963864 27502205 ~ 27507973 (-) False XLOC_004167
TCONS_00007962 lncRNA upstream 1964168 27502509 ~ 27503132 (-) False XLOC_004167
TCONS_00008800 lncRNA upstream 2005237 27543578 ~ 27625465 (-) False XLOC_004169
TCONS_00007969 lncRNA upstream 2054302 27592643 ~ 27625125 (-) False XLOC_004169
TCONS_00007925 mRNA downstream 67712 25436440 ~ 25461336 (-) True XLOC_004149
TCONS_00007923 mRNA downstream 110192 25411914 ~ 25418856 (-) False XLOC_004148
TCONS_00007922 mRNA downstream 144835 25382602 ~ 25384213 (-) True XLOC_004147
TCONS_00007920 mRNA downstream 204514 25313810 ~ 25324534 (-) True XLOC_004146
TCONS_00007919 mRNA downstream 271453 25252466 ~ 25257595 (-) True XLOC_004145
TCONS_00007932 mRNA upstream 174431 25712772 ~ 25733910 (-) False XLOC_004153
TCONS_00007933 mRNA upstream 175754 25714095 ~ 25734417 (-) False XLOC_004153
TCONS_00007934 mRNA upstream 183664 25722005 ~ 25730416 (-) True XLOC_004153
TCONS_00007935 mRNA upstream 213857 25752198 ~ 25777318 (-) False XLOC_004154
TCONS_00007936 mRNA upstream 217095 25755436 ~ 25775447 (-) True XLOC_004154
TCONS_00007927 other downstream 52863 25476099 ~ 25476185 (-) True XLOC_004150
TCONS_00007916 other downstream 323805 25205153 ~ 25205243 (-) True XLOC_004144
TCONS_00007913 other downstream 561161 24967771 ~ 24967887 (-) True XLOC_004142
TCONS_00007910 other downstream 996090 24525676 ~ 24532958 (-) True XLOC_004138
TCONS_00007888 other downstream 1873570 23655350 ~ 23655478 (-) True XLOC_004130
TCONS_00007931 other upstream 131498 25669839 ~ 25669955 (-) True XLOC_004152
TCONS_00007940 other upstream 319600 25857941 ~ 25931082 (-) False XLOC_004157
TCONS_00007943 other upstream 481758 26020099 ~ 26180714 (-) True XLOC_004157
TCONS_00007948 other upstream 695386 26233727 ~ 26237953 (-) True XLOC_004159
TCONS_00007950 other upstream 835657 26373998 ~ 26375518 (-) True XLOC_004160

Expression Profile

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