Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU261600 |
| length | 813 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 3 |
| gene id | nectin3a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 5550419 ~ 5599375 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU261547 | lncRNA | downstream | 84340 | 5503040 ~ 5503942 (-) | True | G220884 |
| TU261527 | lncRNA | downstream | 99274 | 5488775 ~ 5489008 (-) | True | G220864 |
| TU261521 | lncRNA | downstream | 133359 | 5454596 ~ 5454923 (-) | True | G220858 |
| TU261494 | lncRNA | downstream | 144580 | 5443492 ~ 5443702 (-) | True | G220834 |
| TU261478 | lncRNA | downstream | 171287 | 5416785 ~ 5416995 (-) | True | G220826 |
| TU261709 | lncRNA | upstream | 195753 | 5795128 ~ 5795453 (-) | True | G221026 |
| TU261757 | lncRNA | upstream | 271026 | 5870401 ~ 5870627 (-) | True | G221068 |
| TU261950 | lncRNA | upstream | 492538 | 6091913 ~ 6092434 (-) | True | G221214 |
| TU261982 | lncRNA | upstream | 603689 | 6203064 ~ 6204930 (-) | True | G221245 |
| TU262213 | lncRNA | upstream | 726716 | 6326091 ~ 6416808 (-) | True | G221450 |
| XM_026923908.2 | mRNA | downstream | 39235 | 5536198 ~ 5549047 (-) | True | si:ch211-149e23.4 |
| XM_034310860.1 | mRNA | downstream | 100038 | 5451275 ~ 5488244 (-) | True | LOC113532491 |
| XM_026924418.2 | mRNA | downstream | 184964 | 5393818 ~ 5403318 (-) | True | LOC113532789 |
| XM_026943386.2 | mRNA | downstream | 445315 | 5137303 ~ 5142967 (-) | True | kbtbd3 |
| XM_026943570.2 | mRNA | downstream | 474327 | 5110668 ~ 5113955 (-) | True | tomt |
| XM_026924552.2 | mRNA | upstream | 7329 | 5606704 ~ 5609015 (-) | True | diabloa |
| XM_026924516.1 | mRNA | upstream | 22131 | 5621506 ~ 5622471 (-) | True | LOC113532847 |
| XM_026924970.2 | mRNA | upstream | 133360 | 5732735 ~ 5743421 (-) | True | ywhag2 |
| XM_034310516.1 | mRNA | upstream | 169252 | 5768627 ~ 5772520 (-) | True | proca1 |
| XM_026924672.2 | mRNA | upstream | 169252 | 5768627 ~ 5772509 (-) | False | proca1 |
| TU260468 | other | downstream | 1771495 | 3740282 ~ 3816787 (-) | False | LOC113544484 |
| TU260466 | other | downstream | 1771495 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260467 | other | downstream | 1771495 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260175 | other | downstream | 2677117 | 2907326 ~ 2911165 (-) | True | G219651 |
| TU261666 | other | upstream | 110723 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU261738 | other | upstream | 198610 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261846 | other | upstream | 421845 | 6021220 ~ 6024311 (-) | False | dynll2a |
| trnap-cgg_8 | other | upstream | 1596148 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 1793040 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
