Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU261666 |
| length | 770 |
| RNA type | TUCP |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G220990 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 5710098 ~ 5710891 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU261600 | lncRNA | downstream | 110723 | 5588282 ~ 5599375 (-) | False | nectin3a |
| TU261547 | lncRNA | downstream | 206156 | 5503040 ~ 5503942 (-) | True | G220884 |
| TU261527 | lncRNA | downstream | 221090 | 5488775 ~ 5489008 (-) | True | G220864 |
| TU261521 | lncRNA | downstream | 255175 | 5454596 ~ 5454923 (-) | True | G220858 |
| TU261494 | lncRNA | downstream | 266396 | 5443492 ~ 5443702 (-) | True | G220834 |
| TU261709 | lncRNA | upstream | 84237 | 5795128 ~ 5795453 (-) | True | G221026 |
| TU261757 | lncRNA | upstream | 159510 | 5870401 ~ 5870627 (-) | True | G221068 |
| TU261950 | lncRNA | upstream | 381022 | 6091913 ~ 6092434 (-) | True | G221214 |
| TU261982 | lncRNA | upstream | 492173 | 6203064 ~ 6204930 (-) | True | G221245 |
| TU262213 | lncRNA | upstream | 615200 | 6326091 ~ 6416808 (-) | True | G221450 |
| XM_026924516.1 | mRNA | downstream | 87627 | 5621506 ~ 5622471 (-) | True | LOC113532847 |
| XM_026924552.2 | mRNA | downstream | 101083 | 5606704 ~ 5609015 (-) | True | diabloa |
| XM_034310893.1 | mRNA | downstream | 110790 | 5550419 ~ 5599308 (-) | False | nectin3a |
| XM_026924796.2 | mRNA | downstream | 110790 | 5568218 ~ 5599308 (-) | True | nectin3a |
| XM_034310892.1 | mRNA | downstream | 110862 | 5568218 ~ 5599236 (-) | False | nectin3a |
| XM_026924970.2 | mRNA | upstream | 21844 | 5732735 ~ 5743421 (-) | True | ywhag2 |
| XM_034310516.1 | mRNA | upstream | 57736 | 5768627 ~ 5772520 (-) | True | proca1 |
| XM_026924672.2 | mRNA | upstream | 57736 | 5768627 ~ 5772509 (-) | False | proca1 |
| XM_026924574.2 | mRNA | upstream | 76122 | 5787013 ~ 5796975 (-) | False | rab34a |
| XM_026924575.2 | mRNA | upstream | 76122 | 5787013 ~ 5796750 (-) | False | rab34a |
| TU260468 | other | downstream | 1893311 | 3740282 ~ 3816787 (-) | False | LOC113544484 |
| TU260466 | other | downstream | 1893311 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260467 | other | downstream | 1893311 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260166 | other | downstream | 2746748 | 2887907 ~ 2963350 (-) | True | G219642 |
| TU260175 | other | downstream | 2798933 | 2907326 ~ 2911165 (-) | True | G219651 |
| TU261738 | other | upstream | 87094 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261846 | other | upstream | 310329 | 6021220 ~ 6024311 (-) | False | dynll2a |
| trnap-cgg_8 | other | upstream | 1484632 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 1681524 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| TU263800 | other | upstream | 3230127 | 8941018 ~ 8946899 (-) | True | G222809 |
