Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU261757 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G221068 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 5870401 ~ 5870627 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU261709 | lncRNA | downstream | 74948 | 5795128 ~ 5795453 (-) | True | G221026 |
| TU261600 | lncRNA | downstream | 271026 | 5588282 ~ 5599375 (-) | False | nectin3a |
| TU261547 | lncRNA | downstream | 366459 | 5503040 ~ 5503942 (-) | True | G220884 |
| TU261527 | lncRNA | downstream | 381393 | 5488775 ~ 5489008 (-) | True | G220864 |
| TU261521 | lncRNA | downstream | 415478 | 5454596 ~ 5454923 (-) | True | G220858 |
| TU261950 | lncRNA | upstream | 221286 | 6091913 ~ 6092434 (-) | True | G221214 |
| TU261982 | lncRNA | upstream | 332437 | 6203064 ~ 6204930 (-) | True | G221245 |
| TU262213 | lncRNA | upstream | 455464 | 6326091 ~ 6416808 (-) | True | G221450 |
| TU262227 | lncRNA | upstream | 546255 | 6416882 ~ 6417625 (-) | True | G221461 |
| TU262210 | lncRNA | upstream | 643201 | 6513828 ~ 6514965 (-) | True | G221448 |
| XM_026924051.2 | mRNA | downstream | 66428 | 5797928 ~ 5803973 (-) | True | LOC113532612 |
| XM_026924574.2 | mRNA | downstream | 73426 | 5787013 ~ 5796975 (-) | False | rab34a |
| XM_026924575.2 | mRNA | downstream | 73651 | 5787013 ~ 5796750 (-) | False | rab34a |
| XM_026924577.2 | mRNA | downstream | 73678 | 5787013 ~ 5796723 (-) | False | rab34a |
| XM_026924576.2 | mRNA | downstream | 73686 | 5787013 ~ 5796715 (-) | True | rab34a |
| XM_034310538.1 | mRNA | upstream | 68425 | 5939052 ~ 5975719 (-) | True | synrg |
| XM_026924653.2 | mRNA | upstream | 118791 | 5989418 ~ 6003349 (-) | True | hnf1ba |
| XM_026923900.2 | mRNA | upstream | 150518 | 6021145 ~ 6024353 (-) | True | dynll2a |
| XM_026924598.2 | mRNA | upstream | 154836 | 6025463 ~ 6028603 (-) | True | srsf1a |
| XM_026924004.2 | mRNA | upstream | 158619 | 6029246 ~ 6033511 (-) | True | aldoca |
| TU261738 | other | downstream | 66523 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261666 | other | downstream | 159510 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU260468 | other | downstream | 2053614 | 3740282 ~ 3816787 (-) | False | LOC113544484 |
| TU260466 | other | downstream | 2053614 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260467 | other | downstream | 2053614 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU261846 | other | upstream | 150593 | 6021220 ~ 6024311 (-) | False | dynll2a |
| trnap-cgg_8 | other | upstream | 1324896 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 1521788 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| TU263800 | other | upstream | 3070391 | 8941018 ~ 8946899 (-) | True | G222809 |
| TU264952 | other | upstream | 4437433 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
