Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU262227 |
| length | 744 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G221461 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 6416882 ~ 6417625 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU262213 | lncRNA | downstream | 74 | 6326091 ~ 6416808 (-) | True | G221450 |
| TU261982 | lncRNA | downstream | 211952 | 6203064 ~ 6204930 (-) | True | G221245 |
| TU261950 | lncRNA | downstream | 324448 | 6091913 ~ 6092434 (-) | True | G221214 |
| TU261757 | lncRNA | downstream | 546255 | 5870401 ~ 5870627 (-) | True | G221068 |
| TU261709 | lncRNA | downstream | 621429 | 5795128 ~ 5795453 (-) | True | G221026 |
| TU262210 | lncRNA | upstream | 96203 | 6513828 ~ 6514965 (-) | True | G221448 |
| TU262299 | lncRNA | upstream | 221418 | 6639043 ~ 6639829 (-) | False | LOC113532805 |
| TU262406 | lncRNA | upstream | 269964 | 6687589 ~ 6688311 (-) | True | G221618 |
| TU262435 | lncRNA | upstream | 341785 | 6759410 ~ 6759618 (-) | True | G221638 |
| TU262426 | lncRNA | upstream | 343031 | 6760656 ~ 6761787 (-) | True | G221633 |
| XM_026924636.2 | mRNA | downstream | 22575 | 6386179 ~ 6394307 (-) | True | zgc:103681 |
| XM_026924831.2 | mRNA | downstream | 34043 | 6305358 ~ 6382839 (-) | True | tyw1 |
| XM_026924830.2 | mRNA | downstream | 34046 | 6305358 ~ 6382836 (-) | False | tyw1 |
| XM_026923942.2 | mRNA | downstream | 117932 | 6233248 ~ 6298950 (-) | False | caln1 |
| XM_026923943.2 | mRNA | downstream | 125954 | 6233248 ~ 6290928 (-) | False | caln1 |
| XM_026924174.2 | mRNA | upstream | 29500 | 6447125 ~ 6488585 (-) | False | hip1 |
| XM_026924173.2 | mRNA | upstream | 29500 | 6447125 ~ 6488585 (-) | True | hip1 |
| XM_026924175.2 | mRNA | upstream | 29500 | 6447125 ~ 6477503 (-) | False | hip1 |
| XM_026924502.2 | mRNA | upstream | 93611 | 6511236 ~ 6513733 (-) | True | mos |
| XM_034310618.1 | mRNA | upstream | 109847 | 6527472 ~ 6532884 (-) | False | mrpl28 |
| TU261846 | other | downstream | 392571 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 613004 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261666 | other | downstream | 705991 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU260466 | other | downstream | 2600095 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| trnap-cgg_8 | other | upstream | 777898 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 974790 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| TU263800 | other | upstream | 2523393 | 8941018 ~ 8946899 (-) | True | G222809 |
| TU264952 | other | upstream | 3890435 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 6523285 | 12940910 ~ 13007559 (-) | True | nf1a |
