Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU262406 |
| length | 632 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G221618 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 6687589 ~ 6688311 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU262299 | lncRNA | downstream | 47760 | 6639043 ~ 6639829 (-) | False | LOC113532805 |
| TU262210 | lncRNA | downstream | 172624 | 6513828 ~ 6514965 (-) | True | G221448 |
| TU262227 | lncRNA | downstream | 269964 | 6416882 ~ 6417625 (-) | True | G221461 |
| TU262213 | lncRNA | downstream | 270781 | 6326091 ~ 6416808 (-) | True | G221450 |
| TU261982 | lncRNA | downstream | 482659 | 6203064 ~ 6204930 (-) | True | G221245 |
| TU262435 | lncRNA | upstream | 71099 | 6759410 ~ 6759618 (-) | True | G221638 |
| TU262426 | lncRNA | upstream | 72345 | 6760656 ~ 6761787 (-) | True | G221633 |
| TU262458 | lncRNA | upstream | 117844 | 6806155 ~ 6806367 (-) | True | G221659 |
| TU262483 | lncRNA | upstream | 179473 | 6867784 ~ 6870274 (-) | True | G221681 |
| TU262484 | lncRNA | upstream | 183426 | 6871737 ~ 6871979 (-) | True | G221682 |
| XM_034310811.1 | mRNA | downstream | 34171 | 6620567 ~ 6653418 (-) | False | LOC113532805 |
| XM_034310810.1 | mRNA | downstream | 47760 | 6620567 ~ 6639829 (-) | False | LOC113532805 |
| XM_034310809.1 | mRNA | downstream | 47760 | 6620567 ~ 6639829 (-) | False | LOC113532805 |
| XM_034310808.1 | mRNA | downstream | 51299 | 6620567 ~ 6636290 (-) | False | LOC113532805 |
| XM_026924450.2 | mRNA | downstream | 51301 | 6619172 ~ 6636288 (-) | True | LOC113532805 |
| XM_034310652.1 | mRNA | upstream | 60605 | 6748916 ~ 6756266 (-) | False | tubd1 |
| XM_026924352.2 | mRNA | upstream | 60605 | 6748916 ~ 6755376 (-) | True | tubd1 |
| XM_026924556.2 | mRNA | upstream | 142923 | 6831234 ~ 6840971 (-) | True | LOC113532877 |
| XM_026924088.2 | mRNA | upstream | 194817 | 6883128 ~ 6888991 (-) | True | LOC113532633 |
| XM_026924665.2 | mRNA | upstream | 243211 | 6931522 ~ 6936069 (-) | True | atf5b |
| TU261846 | other | downstream | 663278 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 883711 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261666 | other | downstream | 976698 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU260466 | other | downstream | 2870802 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| trnap-cgg_8 | other | upstream | 507212 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 704104 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| TU263800 | other | upstream | 2252707 | 8941018 ~ 8946899 (-) | True | G222809 |
| TU264952 | other | upstream | 3619749 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 6252599 | 12940910 ~ 13007559 (-) | True | nf1a |
