Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU262484 |
| length | 243 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G221682 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 6871737 ~ 6871979 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU262483 | lncRNA | downstream | 1463 | 6867784 ~ 6870274 (-) | True | G221681 |
| TU262458 | lncRNA | downstream | 65370 | 6806155 ~ 6806367 (-) | True | G221659 |
| TU262426 | lncRNA | downstream | 109950 | 6760656 ~ 6761787 (-) | True | G221633 |
| TU262435 | lncRNA | downstream | 112119 | 6759410 ~ 6759618 (-) | True | G221638 |
| TU262406 | lncRNA | downstream | 183426 | 6687589 ~ 6688311 (-) | True | G221618 |
| TU262485 | lncRNA | upstream | 852 | 6872831 ~ 6873359 (-) | True | G221683 |
| TU262657 | lncRNA | upstream | 250738 | 7122717 ~ 7124202 (-) | True | G221812 |
| TU262663 | lncRNA | upstream | 261538 | 7133517 ~ 7178296 (-) | True | G221814 |
| TU262694 | lncRNA | upstream | 346687 | 7218666 ~ 7220929 (-) | True | G221844 |
| TU262771 | lncRNA | upstream | 499391 | 7371370 ~ 7372320 (-) | True | G221902 |
| XM_026924556.2 | mRNA | downstream | 30766 | 6831234 ~ 6840971 (-) | True | LOC113532877 |
| XM_034310652.1 | mRNA | downstream | 115471 | 6748916 ~ 6756266 (-) | False | tubd1 |
| XM_026924352.2 | mRNA | downstream | 116361 | 6748916 ~ 6755376 (-) | True | tubd1 |
| XM_034310809.1 | mRNA | downstream | 231908 | 6620567 ~ 6639829 (-) | False | LOC113532805 |
| XM_026924088.2 | mRNA | upstream | 11149 | 6883128 ~ 6888991 (-) | True | LOC113532633 |
| XM_026924665.2 | mRNA | upstream | 59543 | 6931522 ~ 6936069 (-) | True | atf5b |
| XM_026924666.2 | mRNA | upstream | 59543 | 6931522 ~ 6935788 (-) | False | atf5b |
| XM_034310612.1 | mRNA | upstream | 87144 | 6959123 ~ 7039860 (-) | False | phldb1b |
| XM_034310607.1 | mRNA | upstream | 87144 | 6959123 ~ 7039860 (-) | False | phldb1b |
| TU261846 | other | downstream | 847426 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 1067859 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261666 | other | downstream | 1160846 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU260466 | other | downstream | 3054950 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| trnap-cgg_8 | other | upstream | 323544 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 520436 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| TU263800 | other | upstream | 2069039 | 8941018 ~ 8946899 (-) | True | G222809 |
| TU264952 | other | upstream | 3436081 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 6068931 | 12940910 ~ 13007559 (-) | True | nf1a |
