Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU263284 |
| length | 342 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G222367 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 8132363 ~ 8132704 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403360.2 | lncRNA | downstream | 555307 | 7576554 ~ 7577056 (-) | True | LOC113532601 |
| TU262771 | lncRNA | downstream | 760043 | 7371370 ~ 7372320 (-) | True | G221902 |
| TU262694 | lncRNA | downstream | 911434 | 7218666 ~ 7220929 (-) | True | G221844 |
| TU262663 | lncRNA | downstream | 954067 | 7133517 ~ 7178296 (-) | True | G221814 |
| TU262657 | lncRNA | downstream | 1008161 | 7122717 ~ 7124202 (-) | True | G221812 |
| TU263294 | lncRNA | upstream | 29929 | 8162633 ~ 8162848 (-) | True | G222377 |
| TU263325 | lncRNA | upstream | 64101 | 8196805 ~ 8197207 (-) | True | G222391 |
| TU263469 | lncRNA | upstream | 108360 | 8241064 ~ 8242176 (-) | True | G222522 |
| TU263531 | lncRNA | upstream | 272146 | 8404850 ~ 8406183 (-) | False | sorl1 |
| TU263542 | lncRNA | upstream | 331872 | 8464576 ~ 8491284 (-) | True | G222591 |
| XM_026924611.2 | mRNA | downstream | 224505 | 7745299 ~ 7907858 (-) | False | cadm1b |
| XM_026924614.2 | mRNA | downstream | 224505 | 7745299 ~ 7907858 (-) | False | cadm1b |
| XM_026924610.2 | mRNA | downstream | 224505 | 7745299 ~ 7907858 (-) | True | cadm1b |
| XM_026924615.2 | mRNA | downstream | 224505 | 7754031 ~ 7907858 (-) | False | cadm1b |
| XM_026924934.2 | mRNA | downstream | 540545 | 7578055 ~ 7591818 (-) | True | jam3a |
| XM_034310363.1 | mRNA | upstream | 70958 | 8203662 ~ 8212072 (-) | False | dixdc1a |
| XM_026923916.2 | mRNA | upstream | 70958 | 8203662 ~ 8212072 (-) | False | dixdc1a |
| XM_026923915.2 | mRNA | upstream | 70958 | 8203662 ~ 8212072 (-) | True | dixdc1a |
| XM_026924164.2 | mRNA | upstream | 272125 | 8404829 ~ 8478912 (-) | False | sorl1 |
| XM_026924163.2 | mRNA | upstream | 272125 | 8404829 ~ 8478912 (-) | True | sorl1 |
| XR_004579456.1 | other | downstream | 668864 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| trnap-cgg_8 | other | downstream | 936769 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| TU261846 | other | downstream | 2108052 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 2328485 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261666 | other | downstream | 2421472 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU263800 | other | upstream | 808314 | 8941018 ~ 8946899 (-) | True | G222809 |
| TU264952 | other | upstream | 2175356 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 4808206 | 12940910 ~ 13007559 (-) | True | nf1a |
| XR_004579489.1 | other | upstream | 4937432 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU267049 | other | upstream | 5235059 | 13367763 ~ 13368850 (-) | True | G225622 |
