Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU263563 |
| length | 639 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 4 |
| gene id | G222610 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 8544912 ~ 8548374 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU263542 | lncRNA | downstream | 53628 | 8464576 ~ 8491284 (-) | True | G222591 |
| TU263531 | lncRNA | downstream | 138729 | 8404850 ~ 8406183 (-) | False | sorl1 |
| TU263469 | lncRNA | downstream | 302736 | 8241064 ~ 8242176 (-) | True | G222522 |
| TU263325 | lncRNA | downstream | 347705 | 8196805 ~ 8197207 (-) | True | G222391 |
| TU263294 | lncRNA | downstream | 382064 | 8162633 ~ 8162848 (-) | True | G222377 |
| TU263847 | lncRNA | upstream | 489106 | 9037480 ~ 9043751 (-) | True | G222852 |
| TU264411 | lncRNA | upstream | 1162060 | 9710434 ~ 9713059 (-) | False | LOC113532707 |
| XR_004579474.1 | lncRNA | upstream | 1209784 | 9758158 ~ 9758966 (-) | True | LOC117599042 |
| TU264417 | lncRNA | upstream | 1254118 | 9802492 ~ 9806485 (-) | True | LOC117599044 |
| TU264418 | lncRNA | upstream | 1254570 | 9802944 ~ 9806485 (-) | False | LOC117599044 |
| XM_026924084.2 | mRNA | downstream | 32710 | 8502694 ~ 8512202 (-) | True | il4i1 |
| XM_026923882.2 | mRNA | downstream | 46443 | 8491788 ~ 8498469 (-) | True | sdhdb |
| XM_026924164.2 | mRNA | downstream | 66000 | 8404829 ~ 8478912 (-) | False | sorl1 |
| XM_026924163.2 | mRNA | downstream | 66000 | 8404829 ~ 8478912 (-) | True | sorl1 |
| XM_034310363.1 | mRNA | downstream | 332840 | 8203662 ~ 8212072 (-) | False | dixdc1a |
| XM_026923898.2 | mRNA | upstream | 14796 | 8563170 ~ 8613424 (-) | True | sik2b |
| XM_026923992.2 | mRNA | upstream | 67063 | 8615437 ~ 8630154 (-) | False | laynb |
| XM_026923991.2 | mRNA | upstream | 67063 | 8615437 ~ 8630151 (-) | True | laynb |
| XM_026924683.2 | mRNA | upstream | 97269 | 8645643 ~ 8647238 (-) | True | zgc:162608 |
| XM_034310395.1 | mRNA | upstream | 181568 | 8729942 ~ 8772841 (-) | False | drd2a |
| XR_004579456.1 | other | downstream | 1081413 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| trnap-cgg_8 | other | downstream | 1349318 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| TU261846 | other | downstream | 2520601 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 2741034 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261666 | other | downstream | 2834021 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU263800 | other | upstream | 392644 | 8941018 ~ 8946899 (-) | True | G222809 |
| TU264952 | other | upstream | 1759686 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 4392536 | 12940910 ~ 13007559 (-) | True | nf1a |
| XR_004579489.1 | other | upstream | 4521762 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU267049 | other | upstream | 4819389 | 13367763 ~ 13368850 (-) | True | G225622 |
