Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU263847 |
| length | 328 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G222852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 9037480 ~ 9043751 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU263563 | lncRNA | downstream | 489106 | 8544912 ~ 8548374 (-) | True | G222610 |
| TU263542 | lncRNA | downstream | 546196 | 8464576 ~ 8491284 (-) | True | G222591 |
| TU263531 | lncRNA | downstream | 631297 | 8404850 ~ 8406183 (-) | False | sorl1 |
| TU263469 | lncRNA | downstream | 795304 | 8241064 ~ 8242176 (-) | True | G222522 |
| TU263325 | lncRNA | downstream | 840273 | 8196805 ~ 8197207 (-) | True | G222391 |
| TU264411 | lncRNA | upstream | 666683 | 9710434 ~ 9713059 (-) | False | LOC113532707 |
| XR_004579474.1 | lncRNA | upstream | 714407 | 9758158 ~ 9758966 (-) | True | LOC117599042 |
| TU264417 | lncRNA | upstream | 758741 | 9802492 ~ 9806485 (-) | True | LOC117599044 |
| TU264418 | lncRNA | upstream | 759193 | 9802944 ~ 9806485 (-) | False | LOC117599044 |
| XR_004579476.1 | lncRNA | upstream | 760922 | 9804673 ~ 9806509 (-) | False | LOC117599044 |
| XM_034310866.1 | mRNA | downstream | 222932 | 8799467 ~ 8814548 (-) | True | LOC113532830 |
| XM_026924270.2 | mRNA | downstream | 241452 | 8775146 ~ 8796028 (-) | False | scn3b |
| XM_026924269.2 | mRNA | downstream | 241452 | 8775146 ~ 8796028 (-) | False | scn3b |
| XM_026924271.2 | mRNA | downstream | 250422 | 8775146 ~ 8787058 (-) | False | scn3b |
| XM_026924268.2 | mRNA | downstream | 250425 | 8775146 ~ 8787055 (-) | True | scn3b |
| XM_034310627.1 | mRNA | upstream | 489299 | 9533050 ~ 9567354 (-) | True | mcamb |
| XM_026923911.2 | mRNA | upstream | 489299 | 9533050 ~ 9567354 (-) | False | mcamb |
| XM_026923910.2 | mRNA | upstream | 489299 | 9533050 ~ 9567317 (-) | False | mcamb |
| XM_026923912.2 | mRNA | upstream | 489300 | 9533051 ~ 9567352 (-) | False | mcamb |
| XM_026923914.2 | mRNA | upstream | 541893 | 9585644 ~ 9589292 (-) | True | c1qtnf5 |
| TU263800 | other | downstream | 90581 | 8941018 ~ 8946899 (-) | True | G222809 |
| XR_004579456.1 | other | downstream | 1573981 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| trnap-cgg_8 | other | downstream | 1841886 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| TU261846 | other | downstream | 3013169 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 3233602 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU264952 | other | upstream | 1264309 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 3897159 | 12940910 ~ 13007559 (-) | True | nf1a |
| XR_004579489.1 | other | upstream | 4026385 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU267049 | other | upstream | 4324012 | 13367763 ~ 13368850 (-) | True | G225622 |
| TU268481 | other | upstream | 6768638 | 15812389 ~ 15844783 (-) | True | G226830 |
