Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU264445 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G223353 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 9931356 ~ 9978560 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579459.1 | lncRNA | downstream | 35595 | 9887016 ~ 9895761 (-) | True | LOC117599021 |
| XR_004579476.1 | lncRNA | downstream | 124847 | 9804673 ~ 9806509 (-) | False | LOC117599044 |
| TU264417 | lncRNA | downstream | 124871 | 9802492 ~ 9806485 (-) | True | LOC117599044 |
| TU264418 | lncRNA | downstream | 124871 | 9802944 ~ 9806485 (-) | False | LOC117599044 |
| XR_004579474.1 | lncRNA | downstream | 172390 | 9758158 ~ 9758966 (-) | True | LOC117599042 |
| TU264514 | lncRNA | upstream | 57182 | 10035742 ~ 10035982 (-) | True | G223408 |
| TU264516 | lncRNA | upstream | 60284 | 10038844 ~ 10039358 (-) | True | G223410 |
| TU264545 | lncRNA | upstream | 103021 | 10081581 ~ 10082117 (-) | True | G223437 |
| TU264558 | lncRNA | upstream | 111083 | 10089643 ~ 10089990 (-) | True | G223443 |
| TU264564 | lncRNA | upstream | 122399 | 10100959 ~ 10101166 (-) | True | G223449 |
| XM_026924311.2 | mRNA | downstream | 65025 | 9839316 ~ 9866331 (-) | True | LOC113532742 |
| XM_034310470.1 | mRNA | downstream | 96269 | 9823069 ~ 9835087 (-) | True | LOC113532826 |
| XM_034310471.1 | mRNA | downstream | 108669 | 9717745 ~ 9822687 (-) | True | LOC117599039 |
| XM_026924240.2 | mRNA | downstream | 227432 | 9677259 ~ 9703924 (-) | True | LOC113532707 |
| XM_026924191.2 | mRNA | upstream | 62182 | 10040742 ~ 10070727 (-) | False | ulk2 |
| XM_026924190.2 | mRNA | upstream | 62182 | 10040742 ~ 10070727 (-) | True | ulk2 |
| XM_026923875.2 | mRNA | upstream | 184847 | 10163407 ~ 10208971 (-) | False | sgsm2 |
| XM_026923876.2 | mRNA | upstream | 184847 | 10163407 ~ 10208971 (-) | False | sgsm2 |
| XM_026923874.2 | mRNA | upstream | 184847 | 10163407 ~ 10208971 (-) | True | sgsm2 |
| TU263800 | other | downstream | 984457 | 8941018 ~ 8946899 (-) | True | G222809 |
| XR_004579456.1 | other | downstream | 2467857 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| trnap-cgg_8 | other | downstream | 2735762 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| TU261846 | other | downstream | 3907045 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 4127478 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU264952 | other | upstream | 329500 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 2962350 | 12940910 ~ 13007559 (-) | True | nf1a |
| XR_004579489.1 | other | upstream | 3091576 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU267049 | other | upstream | 3389203 | 13367763 ~ 13368850 (-) | True | G225622 |
| TU268481 | other | upstream | 5833829 | 15812389 ~ 15844783 (-) | True | G226830 |
