Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU265332 |
| length | 275 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G224086 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 11069684 ~ 11069958 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU265085 | lncRNA | downstream | 307951 | 10756498 ~ 10761733 (-) | True | G223855 |
| TU265074 | lncRNA | downstream | 357611 | 10708252 ~ 10712073 (-) | False | appbp2 |
| TU265054 | lncRNA | downstream | 432890 | 10636156 ~ 10636794 (-) | True | G223827 |
| TU265027 | lncRNA | downstream | 457836 | 10560426 ~ 10611848 (-) | True | G223808 |
| TU264978 | lncRNA | downstream | 657004 | 10412456 ~ 10412680 (-) | True | G223766 |
| TU265556 | lncRNA | upstream | 35613 | 11105571 ~ 11168668 (-) | True | G224287 |
| TU265557 | lncRNA | upstream | 35613 | 11105571 ~ 11147758 (-) | False | G224287 |
| TU265558 | lncRNA | upstream | 93921 | 11163879 ~ 11168668 (-) | False | G224287 |
| TU265559 | lncRNA | upstream | 138439 | 11208397 ~ 11220656 (-) | False | aipl1 |
| TU265646 | lncRNA | upstream | 324762 | 11394720 ~ 11397828 (-) | True | G224358 |
| XM_026924318.2 | mRNA | downstream | 1456 | 11064601 ~ 11068228 (-) | True | tmem199 |
| XM_026924212.2 | mRNA | downstream | 46354 | 11017152 ~ 11023330 (-) | True | gemin4 |
| XM_026923928.2 | mRNA | downstream | 231556 | 10826289 ~ 10838128 (-) | True | pipox |
| XM_026923929.2 | mRNA | downstream | 231613 | 10826289 ~ 10838071 (-) | False | pipox |
| XM_026924308.2 | mRNA | downstream | 348351 | 10708385 ~ 10721333 (-) | True | appbp2 |
| XM_034310460.1 | mRNA | upstream | 104044 | 11174002 ~ 11185519 (-) | False | trarg1a |
| XM_026924021.2 | mRNA | upstream | 104044 | 11174002 ~ 11184866 (-) | True | trarg1a |
| XM_034310890.1 | mRNA | upstream | 118292 | 11188250 ~ 11220647 (-) | False | aipl1 |
| XM_034310891.1 | mRNA | upstream | 118292 | 11188250 ~ 11193329 (-) | False | aipl1 |
| XM_026924673.2 | mRNA | upstream | 118292 | 11188250 ~ 11193329 (-) | True | aipl1 |
| TU264952 | other | downstream | 757197 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| TU263800 | other | downstream | 2122785 | 8941018 ~ 8946899 (-) | True | G222809 |
| XR_004579456.1 | other | downstream | 3606185 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| trnap-cgg_8 | other | downstream | 3874090 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| TU261846 | other | downstream | 5045373 | 6021220 ~ 6024311 (-) | False | dynll2a |
| XR_004579509.1 | other | upstream | 1870952 | 12940910 ~ 13007559 (-) | True | nf1a |
| XR_004579489.1 | other | upstream | 2000178 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU267049 | other | upstream | 2297805 | 13367763 ~ 13368850 (-) | True | G225622 |
| TU268481 | other | upstream | 4742431 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU268676 | other | upstream | 5049339 | 16119297 ~ 16165036 (-) | False | G226991 |
