RNA id: TCONS_00007931


Basic Information

Item Value
RNA id TCONS_00007931
length 117
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_004152
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 25669839 ~ 25669955 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TACCACAGCCAGATTACCGTGCAGcctaagaccggttactcactgaagctaagcagggttgagcctcgtcagtacctggatgggagaccacttgggaaaactaggttgctattggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000175046

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008798 lncRNA downstream 192859 25475305 ~ 25476980 (-) False XLOC_004150
TCONS_00007926 lncRNA downstream 192859 25475305 ~ 25476980 (-) False XLOC_004150
TCONS_00008797 lncRNA downstream 193257 25475305 ~ 25476582 (-) False XLOC_004150
TCONS_00007924 lncRNA downstream 256686 25412343 ~ 25413153 (-) True XLOC_004148
TCONS_00007921 lncRNA downstream 260943 25368112 ~ 25408896 (-) False XLOC_004147
TCONS_00008799 lncRNA upstream 949479 26619434 ~ 26666495 (-) False XLOC_004162
TCONS_00007965 lncRNA upstream 1832250 27502205 ~ 27507973 (-) False XLOC_004167
TCONS_00007962 lncRNA upstream 1832554 27502509 ~ 27503132 (-) False XLOC_004167
TCONS_00008800 lncRNA upstream 1873623 27543578 ~ 27625465 (-) False XLOC_004169
TCONS_00007969 lncRNA upstream 1922688 27592643 ~ 27625125 (-) False XLOC_004169
TCONS_00007930 mRNA downstream 130516 25529080 ~ 25539323 (-) True XLOC_004151
TCONS_00007929 mRNA downstream 131498 25529048 ~ 25538341 (-) False XLOC_004151
TCONS_00007925 mRNA downstream 208503 25436440 ~ 25461336 (-) True XLOC_004149
TCONS_00007923 mRNA downstream 250983 25411914 ~ 25418856 (-) False XLOC_004148
TCONS_00007922 mRNA downstream 285626 25382602 ~ 25384213 (-) True XLOC_004147
TCONS_00007932 mRNA upstream 42817 25712772 ~ 25733910 (-) False XLOC_004153
TCONS_00007933 mRNA upstream 44140 25714095 ~ 25734417 (-) False XLOC_004153
TCONS_00007934 mRNA upstream 52050 25722005 ~ 25730416 (-) True XLOC_004153
TCONS_00007935 mRNA upstream 82243 25752198 ~ 25777318 (-) False XLOC_004154
TCONS_00007936 mRNA upstream 85481 25755436 ~ 25775447 (-) True XLOC_004154
TCONS_00007928 other downstream 137359 25528557 ~ 25532480 (-) False XLOC_004151
TCONS_00007927 other downstream 193654 25476099 ~ 25476185 (-) True XLOC_004150
TCONS_00007916 other downstream 464596 25205153 ~ 25205243 (-) True XLOC_004144
TCONS_00007913 other downstream 701952 24967771 ~ 24967887 (-) True XLOC_004142
TCONS_00007910 other downstream 1136881 24525676 ~ 24532958 (-) True XLOC_004138
TCONS_00007940 other upstream 187986 25857941 ~ 25931082 (-) False XLOC_004157
TCONS_00007943 other upstream 350144 26020099 ~ 26180714 (-) True XLOC_004157
TCONS_00007948 other upstream 563772 26233727 ~ 26237953 (-) True XLOC_004159
TCONS_00007950 other upstream 704043 26373998 ~ 26375518 (-) True XLOC_004160
TCONS_00007954 other upstream 899576 26569531 ~ 26577209 (-) True XLOC_004161