Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU265649 |
| length | 231 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G224361 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 11424629 ~ 11424859 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU265648 | lncRNA | downstream | 761 | 11423561 ~ 11423868 (-) | True | G224360 |
| TU265646 | lncRNA | downstream | 26801 | 11394720 ~ 11397828 (-) | True | G224358 |
| TU265559 | lncRNA | downstream | 203973 | 11208397 ~ 11220656 (-) | False | aipl1 |
| TU265556 | lncRNA | downstream | 255961 | 11105571 ~ 11168668 (-) | True | G224287 |
| TU265658 | lncRNA | upstream | 39389 | 11464248 ~ 11464691 (-) | True | G224370 |
| TU265659 | lncRNA | upstream | 41094 | 11465953 ~ 11466243 (-) | True | G224371 |
| TU265662 | lncRNA | upstream | 44233 | 11469092 ~ 11469362 (-) | True | G224374 |
| TU265663 | lncRNA | upstream | 47197 | 11472056 ~ 11473209 (-) | True | G224375 |
| XR_004579491.1 | lncRNA | upstream | 189740 | 11614599 ~ 11644172 (-) | False | LOC113532936 |
| XM_026924196.2 | mRNA | downstream | 1843 | 11403246 ~ 11422786 (-) | False | cluha |
| XM_026924195.2 | mRNA | downstream | 1843 | 11403246 ~ 11422786 (-) | True | cluha |
| XM_026924197.2 | mRNA | downstream | 3154 | 11403246 ~ 11421475 (-) | False | cluha |
| XM_026924338.2 | mRNA | downstream | 22145 | 11374703 ~ 11402484 (-) | True | pafah1b1a |
| XM_026924340.2 | mRNA | downstream | 22942 | 11374703 ~ 11401687 (-) | False | pafah1b1a |
| XM_026923984.2 | mRNA | upstream | 1651 | 11426510 ~ 11440204 (-) | True | si:dkey-54n8.4 |
| XM_026924427.2 | mRNA | upstream | 17890 | 11442749 ~ 11460409 (-) | True | tlcd2 |
| XM_026924802.2 | mRNA | upstream | 75080 | 11499939 ~ 11512932 (-) | True | hif1al |
| XM_026924696.2 | mRNA | upstream | 103198 | 11528057 ~ 11533961 (-) | True | mmp20b |
| XM_026924774.2 | mRNA | upstream | 111776 | 11536635 ~ 11546641 (-) | False | tp53i13 |
| TU264952 | other | downstream | 1112142 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| TU263800 | other | downstream | 2477730 | 8941018 ~ 8946899 (-) | True | G222809 |
| XR_004579456.1 | other | downstream | 3961130 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| trnap-cgg_8 | other | downstream | 4229035 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| TU261846 | other | downstream | 5400318 | 6021220 ~ 6024311 (-) | False | dynll2a |
| XR_004579509.1 | other | upstream | 1516051 | 12940910 ~ 13007559 (-) | True | nf1a |
| XR_004579489.1 | other | upstream | 1645277 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU267049 | other | upstream | 1942904 | 13367763 ~ 13368850 (-) | True | G225622 |
| TU268481 | other | upstream | 4387530 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU268676 | other | upstream | 4694438 | 16119297 ~ 16165036 (-) | False | G226991 |
