Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU266661 |
| length | 629 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G225291 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 12706696 ~ 12707375 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU266565 | lncRNA | downstream | 270628 | 12435447 ~ 12436068 (-) | False | bcas3 |
| TU266317 | lncRNA | downstream | 317063 | 12389252 ~ 12389633 (-) | False | tbx4 |
| TU266315 | lncRNA | downstream | 344603 | 12360206 ~ 12362093 (-) | True | G224970 |
| TU266054 | lncRNA | downstream | 625617 | 12080300 ~ 12081079 (-) | True | G224746 |
| TU266008 | lncRNA | downstream | 730678 | 11973919 ~ 11976018 (-) | True | G224701 |
| TU266669 | lncRNA | upstream | 213599 | 12920974 ~ 12999031 (-) | False | akap1b |
| TU266798 | lncRNA | upstream | 361411 | 13068786 ~ 13162208 (-) | False | G225410 |
| TU266799 | lncRNA | upstream | 361411 | 13068786 ~ 13175992 (-) | True | G225410 |
| TU267043 | lncRNA | upstream | 651435 | 13358810 ~ 13359021 (-) | True | G225619 |
| TU267045 | lncRNA | upstream | 657028 | 13364403 ~ 13364617 (-) | False | G225621 |
| XM_026924231.2 | mRNA | downstream | 67971 | 12435206 ~ 12638725 (-) | False | bcas3 |
| XM_026924230.2 | mRNA | downstream | 67971 | 12435206 ~ 12638725 (-) | True | bcas3 |
| XM_026924234.2 | mRNA | downstream | 67971 | 12437549 ~ 12638725 (-) | False | bcas3 |
| XM_026924233.2 | mRNA | downstream | 67971 | 12437549 ~ 12638725 (-) | False | bcas3 |
| XM_026924236.2 | mRNA | downstream | 67971 | 12489848 ~ 12638725 (-) | False | bcas3 |
| XM_026924551.2 | mRNA | upstream | 213588 | 12920963 ~ 12938519 (-) | True | akap1b |
| XM_034310632.1 | mRNA | upstream | 233535 | 12940910 ~ 13007559 (-) | False | nf1a |
| XM_034310629.1 | mRNA | upstream | 233535 | 12940910 ~ 13007559 (-) | False | nf1a |
| XM_034310630.1 | mRNA | upstream | 233535 | 12940910 ~ 13007559 (-) | False | nf1a |
| XM_034310628.1 | mRNA | upstream | 233535 | 12940910 ~ 13007559 (-) | False | nf1a |
| TU264952 | other | downstream | 2394209 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| TU263800 | other | downstream | 3759797 | 8941018 ~ 8946899 (-) | True | G222809 |
| XR_004579456.1 | other | downstream | 5243197 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| trnap-cgg_8 | other | downstream | 5511102 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| TU261846 | other | downstream | 6682385 | 6021220 ~ 6024311 (-) | False | dynll2a |
| XR_004579509.1 | other | upstream | 233535 | 12940910 ~ 13007559 (-) | True | nf1a |
| XR_004579489.1 | other | upstream | 362761 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU267049 | other | upstream | 660388 | 13367763 ~ 13368850 (-) | True | G225622 |
| TU268481 | other | upstream | 3105014 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU268676 | other | upstream | 3411922 | 16119297 ~ 16165036 (-) | False | G226991 |
