Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU268925 |
| length | 226 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G227207 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 16317697 ~ 16317922 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0019825 | oxygen binding | molecular_function |
| id | description |
|---|---|
| ko04974 | Protein digestion and absorption |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU268677 | lncRNA | downstream | 190895 | 16119297 ~ 16126802 (-) | True | G226991 |
| TU268688 | lncRNA | downstream | 211331 | 16103733 ~ 16106366 (-) | True | G227002 |
| XR_004579521.1 | lncRNA | downstream | 225190 | 16091314 ~ 16092507 (-) | True | LOC117599083 |
| TU268661 | lncRNA | downstream | 286733 | 16030247 ~ 16030964 (-) | True | G226980 |
| TU268660 | lncRNA | downstream | 287029 | 16030247 ~ 16030668 (-) | False | G226980 |
| TU268928 | lncRNA | upstream | 40414 | 16358336 ~ 16438387 (-) | False | G227210 |
| TU268929 | lncRNA | upstream | 119618 | 16437540 ~ 16438387 (-) | True | G227210 |
| TU268955 | lncRNA | upstream | 146014 | 16463936 ~ 16464136 (-) | True | G227233 |
| TU268978 | lncRNA | upstream | 216851 | 16534773 ~ 16535241 (-) | True | G227256 |
| TU268985 | lncRNA | upstream | 222933 | 16540855 ~ 16541061 (-) | True | G227263 |
| XM_034310657.1 | mRNA | downstream | 8007 | 16280788 ~ 16309690 (-) | False | egln2 |
| XM_026934806.2 | mRNA | downstream | 10000 | 16280788 ~ 16307697 (-) | True | egln2 |
| XM_026935060.2 | mRNA | downstream | 44157 | 16266578 ~ 16273540 (-) | True | tmem160 |
| XM_026934876.2 | mRNA | downstream | 200866 | 16108511 ~ 16116831 (-) | True | ap2s1 |
| XM_026934967.2 | mRNA | downstream | 293706 | 16017085 ~ 16023991 (-) | True | ppm1na |
| XM_026935120.2 | mRNA | upstream | 2156 | 16320078 ~ 16328662 (-) | True | pitpnaa |
| XM_026934805.2 | mRNA | upstream | 12006 | 16329928 ~ 16352988 (-) | True | slc43a2a |
| XM_026934601.2 | mRNA | upstream | 36742 | 16354664 ~ 16364336 (-) | True | si:dkey-118k5.3 |
| XM_026934696.2 | mRNA | upstream | 48272 | 16366194 ~ 16416374 (-) | False | myo1cb |
| XM_026934698.2 | mRNA | upstream | 48272 | 16366194 ~ 16412396 (-) | False | myo1cb |
| TU268923 | other | downstream | 352 | 16316651 ~ 16317345 (-) | True | G227205 |
| TU268676 | other | downstream | 152661 | 16119297 ~ 16165036 (-) | False | G226991 |
| TU268481 | other | downstream | 472914 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU267049 | other | downstream | 2948847 | 13367763 ~ 13368850 (-) | True | G225622 |
| XR_004579489.1 | other | downstream | 3236837 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU268927 | other | upstream | 45459 | 16363381 ~ 16364304 (-) | False | si:dkey-118k5.3 |
| XR_003403925.1 | other | upstream | 2896837 | 19214759 ~ 19214923 (-) | True | LOC113539409 |
| TU270720 | other | upstream | 3390393 | 19708315 ~ 19708841 (-) | True | G228758 |
| trnae-cuc_28 | other | upstream | 5033321 | 21351243 ~ 21351314 (-) | True | trnae-cuc_28 |
| XR_004579494.1 | other | upstream | 5433213 | 21751135 ~ 21811084 (-) | True | gdpd5b |
