Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU268955 |
| length | 201 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G227233 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 16463936 ~ 16464136 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU268928 | lncRNA | downstream | 25549 | 16358336 ~ 16438387 (-) | False | G227210 |
| TU268929 | lncRNA | downstream | 25549 | 16437540 ~ 16438387 (-) | True | G227210 |
| TU268925 | lncRNA | downstream | 146014 | 16317697 ~ 16317922 (-) | True | G227207 |
| TU268677 | lncRNA | downstream | 337134 | 16119297 ~ 16126802 (-) | True | G226991 |
| TU268688 | lncRNA | downstream | 357570 | 16103733 ~ 16106366 (-) | True | G227002 |
| TU268978 | lncRNA | upstream | 70637 | 16534773 ~ 16535241 (-) | True | G227256 |
| TU268985 | lncRNA | upstream | 76719 | 16540855 ~ 16541061 (-) | True | G227263 |
| TU269003 | lncRNA | upstream | 92549 | 16556685 ~ 16556899 (-) | True | G227281 |
| TU269008 | lncRNA | upstream | 96869 | 16561005 ~ 16561214 (-) | True | G227286 |
| TU269010 | lncRNA | upstream | 99352 | 16563488 ~ 16563694 (-) | True | G227288 |
| XM_026934696.2 | mRNA | downstream | 47562 | 16366194 ~ 16416374 (-) | False | myo1cb |
| XM_026934698.2 | mRNA | downstream | 51540 | 16366194 ~ 16412396 (-) | False | myo1cb |
| XM_034310540.1 | mRNA | downstream | 51540 | 16366194 ~ 16412396 (-) | True | myo1cb |
| XM_026934697.2 | mRNA | downstream | 67679 | 16366194 ~ 16396257 (-) | False | myo1cb |
| XM_034310541.1 | mRNA | downstream | 68404 | 16366194 ~ 16395532 (-) | False | myo1cb |
| XM_026934603.2 | mRNA | upstream | 10799 | 16474935 ~ 16479645 (-) | True | slc46a1 |
| XM_026934605.2 | mRNA | upstream | 11360 | 16475496 ~ 16479647 (-) | False | slc46a1 |
| XM_026935154.2 | mRNA | upstream | 37428 | 16501564 ~ 16518551 (-) | True | unc119a |
| XM_026934888.2 | mRNA | upstream | 56754 | 16520890 ~ 16524642 (-) | True | crybb1l3 |
| XM_026935156.2 | mRNA | upstream | 389043 | 16853179 ~ 16857519 (-) | True | tspan13a |
| TU268927 | other | downstream | 99632 | 16363381 ~ 16364304 (-) | False | si:dkey-118k5.3 |
| TU268923 | other | downstream | 146591 | 16316651 ~ 16317345 (-) | True | G227205 |
| TU268676 | other | downstream | 298900 | 16119297 ~ 16165036 (-) | False | G226991 |
| TU268481 | other | downstream | 619153 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU267049 | other | downstream | 3095086 | 13367763 ~ 13368850 (-) | True | G225622 |
| XR_003403925.1 | other | upstream | 2750623 | 19214759 ~ 19214923 (-) | True | LOC113539409 |
| TU270720 | other | upstream | 3244179 | 19708315 ~ 19708841 (-) | True | G228758 |
| trnae-cuc_28 | other | upstream | 4887107 | 21351243 ~ 21351314 (-) | True | trnae-cuc_28 |
| XR_004579494.1 | other | upstream | 5286999 | 21751135 ~ 21811084 (-) | True | gdpd5b |
| XR_004579495.1 | other | upstream | 5286999 | 21751135 ~ 21811083 (-) | False | gdpd5b |
