Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026934584.2 |
| length | 1355 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | psenen |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 17434055 ~ 17438614 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007219 | Notch signaling pathway | biological_process |
| GO:0043524 | negative regulation of neuron apoptotic process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU269561 | lncRNA | downstream | 27692 | 17405948 ~ 17407225 (-) | True | G227755 |
| TU269426 | lncRNA | downstream | 127193 | 17286343 ~ 17307724 (-) | True | G227640 |
| XR_004579543.1 | lncRNA | downstream | 129555 | 17302063 ~ 17305362 (-) | True | LOC117599113 |
| TU269401 | lncRNA | downstream | 194989 | 17239127 ~ 17239928 (-) | False | LOC113539242 |
| TU269369 | lncRNA | downstream | 271332 | 17161511 ~ 17163585 (-) | True | G227589 |
| TU269607 | lncRNA | upstream | 48017 | 17486631 ~ 17489432 (-) | False | G227786 |
| TU269609 | lncRNA | upstream | 48017 | 17486631 ~ 17489432 (-) | True | G227786 |
| TU270036 | lncRNA | upstream | 635982 | 18074596 ~ 18074799 (-) | True | G228131 |
| TU270092 | lncRNA | upstream | 949894 | 18388508 ~ 18392636 (-) | True | rwdd3 |
| TU270099 | lncRNA | upstream | 978840 | 18417454 ~ 18418564 (-) | True | G228188 |
| XM_026934913.2 | mRNA | downstream | 2601 | 17429752 ~ 17432316 (-) | True | hspb6 |
| XM_026934910.2 | mRNA | downstream | 14456 | 17414024 ~ 17420461 (-) | False | lin37 |
| XM_026934911.2 | mRNA | downstream | 14466 | 17414024 ~ 17420451 (-) | False | lin37 |
| XM_026934912.2 | mRNA | downstream | 14685 | 17414024 ~ 17420232 (-) | True | lin37 |
| XM_034310935.1 | mRNA | downstream | 97023 | 17328119 ~ 17337894 (-) | True | LOC113539361 |
| XM_026935078.2 | mRNA | upstream | 79393 | 17518007 ~ 17568547 (-) | True | gabbr1a |
| XM_026935080.2 | mRNA | upstream | 79393 | 17518007 ~ 17562515 (-) | False | gabbr1a |
| XM_026934965.2 | mRNA | upstream | 131914 | 17570528 ~ 17580546 (-) | True | sh3bp5la |
| XM_026935118.2 | mRNA | upstream | 144725 | 17583339 ~ 17589221 (-) | True | mgat1a |
| XM_026935119.2 | mRNA | upstream | 144725 | 17583339 ~ 17588524 (-) | False | mgat1a |
| TU268927 | other | downstream | 1070613 | 16363381 ~ 16364304 (-) | False | si:dkey-118k5.3 |
| TU268923 | other | downstream | 1117572 | 16316651 ~ 16317345 (-) | True | G227205 |
| TU268676 | other | downstream | 1269881 | 16119297 ~ 16165036 (-) | False | G226991 |
| TU268481 | other | downstream | 1590134 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU267049 | other | downstream | 4066067 | 13367763 ~ 13368850 (-) | True | G225622 |
| XR_003403925.1 | other | upstream | 1776145 | 19214759 ~ 19214923 (-) | True | LOC113539409 |
| TU270720 | other | upstream | 2269701 | 19708315 ~ 19708841 (-) | True | G228758 |
| trnae-cuc_28 | other | upstream | 3912629 | 21351243 ~ 21351314 (-) | True | trnae-cuc_28 |
| XR_004579494.1 | other | upstream | 4312521 | 21751135 ~ 21811084 (-) | True | gdpd5b |
| XR_004579495.1 | other | upstream | 4312521 | 21751135 ~ 21811083 (-) | False | gdpd5b |
