Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU270036 |
| length | 204 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G228131 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 18074596 ~ 18074799 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU269607 | lncRNA | downstream | 585164 | 17486631 ~ 17489432 (-) | False | G227786 |
| TU269609 | lncRNA | downstream | 585164 | 17486631 ~ 17489432 (-) | True | G227786 |
| TU269582 | lncRNA | downstream | 636010 | 17434055 ~ 17438586 (-) | False | psenen |
| TU269583 | lncRNA | downstream | 636010 | 17434055 ~ 17438586 (-) | True | psenen |
| TU269561 | lncRNA | downstream | 667371 | 17405948 ~ 17407225 (-) | True | G227755 |
| TU270092 | lncRNA | upstream | 313709 | 18388508 ~ 18392636 (-) | True | rwdd3 |
| TU270099 | lncRNA | upstream | 342655 | 18417454 ~ 18418564 (-) | True | G228188 |
| TU270408 | lncRNA | upstream | 486638 | 18561437 ~ 18618921 (-) | False | pxylp1 |
| TU270432 | lncRNA | upstream | 531128 | 18605927 ~ 18608241 (-) | True | G228483 |
| TU270520 | lncRNA | upstream | 936625 | 19011424 ~ 19012679 (-) | True | G228564 |
| XM_026934718.2 | mRNA | downstream | 39622 | 18006444 ~ 18034974 (-) | True | plppr4a |
| XM_026934749.2 | mRNA | downstream | 89047 | 17975631 ~ 17985549 (-) | False | palmda |
| XM_034310487.1 | mRNA | downstream | 92358 | 17975631 ~ 17982238 (-) | True | palmda |
| XM_034310635.1 | mRNA | downstream | 101671 | 17962990 ~ 17972925 (-) | False | si:ch211-153l6.6 |
| XM_026934737.2 | mRNA | downstream | 103708 | 17962990 ~ 17970888 (-) | True | si:ch211-153l6.6 |
| XM_034310633.1 | mRNA | upstream | 249741 | 18324540 ~ 18345891 (-) | True | ptbp2b |
| XM_026934950.2 | mRNA | upstream | 314313 | 18389112 ~ 18392745 (-) | False | rwdd3 |
| XM_026934925.2 | mRNA | upstream | 318368 | 18393167 ~ 18400086 (-) | True | LOC113539254 |
| XM_034310839.1 | mRNA | upstream | 327928 | 18402727 ~ 18422483 (-) | False | LOC113539356 |
| XM_026935072.2 | mRNA | upstream | 327928 | 18402727 ~ 18410057 (-) | True | LOC113539356 |
| TU268927 | other | downstream | 1710292 | 16363381 ~ 16364304 (-) | False | si:dkey-118k5.3 |
| TU268923 | other | downstream | 1757251 | 16316651 ~ 16317345 (-) | True | G227205 |
| TU268676 | other | downstream | 1909560 | 16119297 ~ 16165036 (-) | False | G226991 |
| TU268481 | other | downstream | 2229813 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU267049 | other | downstream | 4705746 | 13367763 ~ 13368850 (-) | True | G225622 |
| XR_003403925.1 | other | upstream | 1139960 | 19214759 ~ 19214923 (-) | True | LOC113539409 |
| TU270720 | other | upstream | 1633516 | 19708315 ~ 19708841 (-) | True | G228758 |
| trnae-cuc_28 | other | upstream | 3276444 | 21351243 ~ 21351314 (-) | True | trnae-cuc_28 |
| XR_004579494.1 | other | upstream | 3676336 | 21751135 ~ 21811084 (-) | True | gdpd5b |
| XR_004579495.1 | other | upstream | 3676336 | 21751135 ~ 21811083 (-) | False | gdpd5b |
