Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU270432 |
| length | 1120 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G228483 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 18605927 ~ 18608241 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU270099 | lncRNA | downstream | 187363 | 18417454 ~ 18418564 (-) | True | G228188 |
| TU270092 | lncRNA | downstream | 213291 | 18388508 ~ 18392636 (-) | True | rwdd3 |
| TU270036 | lncRNA | downstream | 531128 | 18074596 ~ 18074799 (-) | True | G228131 |
| TU269607 | lncRNA | downstream | 1116495 | 17486631 ~ 17489432 (-) | False | G227786 |
| TU270520 | lncRNA | upstream | 403183 | 19011424 ~ 19012679 (-) | True | G228564 |
| TU270593 | lncRNA | upstream | 740398 | 19348639 ~ 19348839 (-) | True | G228635 |
| TU270655 | lncRNA | upstream | 956729 | 19564970 ~ 19565203 (-) | True | G228697 |
| TU270665 | lncRNA | upstream | 963951 | 19572192 ~ 19572425 (-) | False | LOC117599059 |
| TU270710 | lncRNA | upstream | 1076642 | 19684883 ~ 19685247 (-) | True | G228748 |
| XM_026934594.2 | mRNA | downstream | 29996 | 18561422 ~ 18575931 (-) | True | pxylp1 |
| XM_026934596.2 | mRNA | downstream | 35281 | 18561422 ~ 18570646 (-) | False | pxylp1 |
| XM_034310839.1 | mRNA | downstream | 183444 | 18402727 ~ 18422483 (-) | False | LOC113539356 |
| XM_026935072.2 | mRNA | downstream | 195870 | 18402727 ~ 18410057 (-) | True | LOC113539356 |
| XM_026934925.2 | mRNA | downstream | 205841 | 18393167 ~ 18400086 (-) | True | LOC113539254 |
| XM_034310712.1 | mRNA | upstream | 42855 | 18651096 ~ 18872252 (-) | True | LOC113539090 |
| XM_034310713.1 | mRNA | upstream | 42855 | 18651096 ~ 18800417 (-) | False | LOC113539090 |
| XM_026934772.2 | mRNA | upstream | 276144 | 18884385 ~ 18948975 (-) | False | aplp1 |
| XM_026934773.2 | mRNA | upstream | 276144 | 18884385 ~ 18948975 (-) | False | aplp1 |
| XM_026934771.2 | mRNA | upstream | 276144 | 18884385 ~ 18948975 (-) | True | aplp1 |
| TU268927 | other | downstream | 2241623 | 16363381 ~ 16364304 (-) | False | si:dkey-118k5.3 |
| TU268923 | other | downstream | 2288582 | 16316651 ~ 16317345 (-) | True | G227205 |
| TU268676 | other | downstream | 2440891 | 16119297 ~ 16165036 (-) | False | G226991 |
| TU268481 | other | downstream | 2761144 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU267049 | other | downstream | 5237077 | 13367763 ~ 13368850 (-) | True | G225622 |
| XR_003403925.1 | other | upstream | 606518 | 19214759 ~ 19214923 (-) | True | LOC113539409 |
| TU270720 | other | upstream | 1100074 | 19708315 ~ 19708841 (-) | True | G228758 |
| trnae-cuc_28 | other | upstream | 2743002 | 21351243 ~ 21351314 (-) | True | trnae-cuc_28 |
| XR_004579494.1 | other | upstream | 3142894 | 21751135 ~ 21811084 (-) | True | gdpd5b |
| XR_004579495.1 | other | upstream | 3142894 | 21751135 ~ 21811083 (-) | False | gdpd5b |
