Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026923881.2 |
| length | 1313 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 7 |
| gene id | tnfaip1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 10211586 ~ 10218371 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0051260 | protein homooligomerization | biological_process |
| id | description |
|---|---|
| K15074 | BACURD; BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU264865 | lncRNA | downstream | 48214 | 10161783 ~ 10163372 (-) | True | G223676 |
| TU264564 | lncRNA | downstream | 110420 | 10100959 ~ 10101166 (-) | True | G223449 |
| TU264558 | lncRNA | downstream | 121596 | 10089643 ~ 10089990 (-) | True | G223443 |
| TU264545 | lncRNA | downstream | 129469 | 10081581 ~ 10082117 (-) | True | G223437 |
| TU264516 | lncRNA | downstream | 172228 | 10038844 ~ 10039358 (-) | True | G223410 |
| TU264978 | lncRNA | upstream | 194085 | 10412456 ~ 10412680 (-) | True | G223766 |
| TU265027 | lncRNA | upstream | 342055 | 10560426 ~ 10611848 (-) | True | G223808 |
| TU265054 | lncRNA | upstream | 417785 | 10636156 ~ 10636794 (-) | True | G223827 |
| TU265074 | lncRNA | upstream | 489881 | 10708252 ~ 10712073 (-) | False | appbp2 |
| TU265085 | lncRNA | upstream | 538127 | 10756498 ~ 10761733 (-) | True | G223855 |
| XM_026923875.2 | mRNA | downstream | 2615 | 10163407 ~ 10208971 (-) | False | sgsm2 |
| XM_026923876.2 | mRNA | downstream | 2615 | 10163407 ~ 10208971 (-) | False | sgsm2 |
| XM_026923874.2 | mRNA | downstream | 2615 | 10163407 ~ 10208971 (-) | True | sgsm2 |
| XM_026924191.2 | mRNA | downstream | 140859 | 10040742 ~ 10070727 (-) | False | ulk2 |
| XM_026924190.2 | mRNA | downstream | 140859 | 10040742 ~ 10070727 (-) | True | ulk2 |
| XM_026924926.2 | mRNA | upstream | 89679 | 10308050 ~ 10312516 (-) | True | LOC113533081 |
| XM_026924107.2 | mRNA | upstream | 102460 | 10320831 ~ 10342884 (-) | True | supt5h |
| XM_026924110.2 | mRNA | upstream | 102460 | 10320831 ~ 10342883 (-) | False | supt5h |
| XM_026924108.2 | mRNA | upstream | 102460 | 10320831 ~ 10342883 (-) | False | supt5h |
| XM_026924111.2 | mRNA | upstream | 102694 | 10321065 ~ 10342884 (-) | False | supt5h |
| TU263800 | other | downstream | 1264687 | 8941018 ~ 8946899 (-) | True | G222809 |
| XR_004579456.1 | other | downstream | 2748087 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| trnap-cgg_8 | other | downstream | 3015992 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| TU261846 | other | downstream | 4187275 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 4407708 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU264952 | other | upstream | 89689 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 2722539 | 12940910 ~ 13007559 (-) | True | nf1a |
| XR_004579489.1 | other | upstream | 2851765 | 13070136 ~ 13080860 (-) | True | wsb1 |
| TU267049 | other | upstream | 3149392 | 13367763 ~ 13368850 (-) | True | G225622 |
| TU268481 | other | upstream | 5594018 | 15812389 ~ 15844783 (-) | True | G226830 |
