RNA id: XM_026924502.2


Basic Information

Item Value
RNA id XM_026924502.2
length 2498
RNA type mRNA
GC content 0.51
exon number 1
gene id mos
representative True

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 6511236 ~ 6513733 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

CCATTACATTTGTGACCCCCACCACATGGTTTGGTCCCCGTGGACATATAATACACTATTAGGCTGTACAAACCATCTCTCTCCCCGGCATGTTTATGTGAGGAGTGTGGAGCCATTCACGACTCAACCAATGTCCGCTCCGCAgtgagtcatgtgacatggACAAACATGATCACCTGGCCATTCCGGGTTGCCAGAATGGAGTCATTCCATACAGCACGAGTCCGGCTGTTTTAAAACCTCCTACTTTCACTGAATCATTGTAAAATCTTAAAATGACATTATGTGGCGTACAGGAAtagcagtaaataaaaataaaatcattactaTTCCAGAAAAGGGGTTTAAAAAGGCCAGTAGGGTAGGAAACCCGATCAATCTGGCAACACAGTGAGCGAGGCAAATCCGAAGCGCTTGTAACCGCGCCGTGCAGCTCCTGCTCCTCAGCACCATGCCGTCCCCGATCCCCGTGACACGCCTTCTCCCGAGAGACTTCGGTCTCACGCTGGGCGTCTGCAGCAGCCCACTCACTAAACAGGCAGGGGACGCGACCCTTCGTGTGCCGGTCACCGCGTTTCACGGGAAGCTCGCGTGCAGACTCTGGTCTTCTGTGATCCACTGGCGCGAGCTCTGTGATCTGGAGCCCATCGGCTCCGGTGGATTTGGCTTGGTGTTCAGAGCCACGTACTTCGGTGAGACGGTGGCGGTGAAGCGCGTCAAGTGCGCCAAGAACAAACTGGCTTCGCGGCAGAGTTTCTGGGCCGAGCTGAACGCGGCGCACCTGCGGCACGAGAACCTGGTGCGGGTGATCGCCGCCAGCACGCAGGCCAACGGCGACGACCTCTTGGGCGCGAGCGGCGACAGCGTCATCGGCACCATCATCATGGAGCACGCGGGCGATGTGAACCTGCAGCAGGTGATCTACAGCGCCGCCGAGCCGCTGCGCCCCGAATCCTGCGTGCGTTACGCAGCCGACGTGGCGCGCGCCCTTCGCCACCTGCACGCCCACGGCGTCGTGCACTTGGACCTGAAACCCGCAAACGTCATCGTGTCCCGAACGGGCGTGTGCAAGCTGGCGGATTTCGGGTGCTCGTTAAAAGTGGAGCTCGAGCGCGATCGCCATGCCTCGCCTCGCCAGATGGAGATCGGCGGCACGTACACGCACCGAGCGCCCGAACTCCTCAGGGGAGAGGACGCAACGCCTGGCGCGGACGTCTACTCTTTCGGCGTGACTCTCTGGCAGCTGCTCACGCGCGAGCAGCCGTATGAAGGAGAGCGACAGCACATCCTGTATGCCGTGGTCGCCTTCAACCTGCGCCCTGATCTAAACAAGCACGTGTTCAGCCCGTCCGGACCGGGCCGCTCGTTTAAGGAGCTCCTCAGTCGGTGCTGGAGCGCGGAACCGAGCCACAGACCGAGCGCAGAGCAGCTCCTTACAGAGCTCTCCGACTTTCCACCATGATCTCCAGCCCAGTGTAAAACCTTCTCCTGTCTGATAGAAACGCCACCTGTTTGCCCTGATGCAGTTTTCATAGCGGCTCCTACGATCTTCACACACTGTGTAATCCTGTCTCATATTGAAGTCGGATTGTGATGGTGGATGTAGCTCAAGACCCAGAGGACTCttctattattttaatatgatcTTAAAATATTCTTTGCAATGGCCCCTTTTTGTCtataattattgtaaataagTGTCGagatgtataaatataatttgtgtaaatgtgcattgatgttttatattttcaaatggATTTGATTAAACCTTTTTTCTTGTACACATTAGTCTTTCTAAATCAGATCAGATGGATCTTCTGTATCTCTGTTCTTTATCTAAAGCTAGTGGTTGTGTGTTGCAGTACTGGGGGAGTCATGGCCATGCAGAGTTCATCCTGTTACTGATACACACCTGATCCAACTAATCAGCTACCAGTTAAACCCTCCTCGAGCTGGAGCAGGTGTGCTGGTCCCCACAAGGCCAGAGATCTCCCTCTTCATAATTTCAAATCTCTCTGGACAGATTCTAGATGCAAGATTTTACATGACTCCATACTAACATAATATTAAGACTGTGTGGTTAAAGCATGTTATATTGGCAGGGAATTCCTTTTCAGTGCTGGCCATTTCTGTACCTCTCACACATTTAGGACCAAGCCCACTTTAAGCTACAGCTAAAATTTGTAAGGATCCAAAAATCACTAAAACATCCCacatgatgaaataaaacaagttCTACATCACATCTTTAAACTGCACTTACGCTTTACTAAAAACATGAGTGATCAATCTTTAATGTACCAAAATAAAAGGCCAACAATTCCaattttggaggaaaaaaaaaaagcaagacaaaGAAGGCATTTTGTCCCAAAAATATTCAGACTACACTACCTATGTCTTGCACACGTCAGAGCCTGCAGCTGCAGCCGTACTTAACACGCCACAATGGTCCTGCTttggagtgtgtgaatgtaactggggaaaaaaaaaaa

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04367 MOS; proto-oncogene serine/threonine-protein kinase mos

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU262227 lncRNA downstream 93611 6416882 ~ 6417625 (-) True G221461
TU262213 lncRNA downstream 94428 6326091 ~ 6416808 (-) True G221450
TU261982 lncRNA downstream 306306 6203064 ~ 6204930 (-) True G221245
TU261950 lncRNA downstream 418802 6091913 ~ 6092434 (-) True G221214
TU261757 lncRNA downstream 640609 5870401 ~ 5870627 (-) True G221068
TU262210 lncRNA upstream 95 6513828 ~ 6514965 (-) True G221448
TU262299 lncRNA upstream 125310 6639043 ~ 6639829 (-) False LOC113532805
TU262406 lncRNA upstream 173856 6687589 ~ 6688311 (-) True G221618
TU262435 lncRNA upstream 245677 6759410 ~ 6759618 (-) True G221638
TU262426 lncRNA upstream 246923 6760656 ~ 6761787 (-) True G221633
XM_026924174.2 mRNA downstream 22651 6447125 ~ 6488585 (-) False hip1
XM_026924173.2 mRNA downstream 22651 6447125 ~ 6488585 (-) True hip1
XM_026924175.2 mRNA downstream 33733 6447125 ~ 6477503 (-) False hip1
XM_026924636.2 mRNA downstream 116929 6386179 ~ 6394307 (-) True zgc:103681
XM_026924831.2 mRNA downstream 128397 6305358 ~ 6382839 (-) True tyw1
XM_034310618.1 mRNA upstream 13739 6527472 ~ 6532884 (-) False mrpl28
XM_034310616.1 mRNA upstream 13739 6527472 ~ 6532848 (-) True mrpl28
XM_034310617.1 mRNA upstream 13739 6527472 ~ 6532841 (-) False mrpl28
XM_034310619.1 mRNA upstream 13739 6527472 ~ 6532785 (-) False mrpl28
XM_026924405.2 mRNA upstream 22315 6536048 ~ 6554451 (-) True cul5a
TU261846 other downstream 486925 6021220 ~ 6024311 (-) False dynll2a
TU261738 other downstream 707358 5797985 ~ 5803878 (-) False LOC113532612
TU261666 other downstream 800345 5710098 ~ 5710891 (-) True G220990
TU260466 other downstream 2694449 3811560 ~ 3816787 (-) False LOC113544484
trnap-cgg_8 other upstream 681790 7195523 ~ 7195594 (-) True trnap-cgg_8
XR_004579456.1 other upstream 878682 7392415 ~ 7463499 (-) True zgc:77784
TU263800 other upstream 2427285 8941018 ~ 8946899 (-) True G222809
TU264952 other upstream 3794327 10308060 ~ 10312487 (-) False LOC113533081
XR_004579509.1 other upstream 6427177 12940910 ~ 13007559 (-) True nf1a

Expression Profile