Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026924576.2 |
| length | 1323 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 12 |
| gene id | rab34a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 5787013 ~ 5796975 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07921 | RAB34; Ras-related protein Rab-34 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU261600 | lncRNA | downstream | 187638 | 5588282 ~ 5599375 (-) | False | nectin3a |
| TU261547 | lncRNA | downstream | 283071 | 5503040 ~ 5503942 (-) | True | G220884 |
| TU261527 | lncRNA | downstream | 298005 | 5488775 ~ 5489008 (-) | True | G220864 |
| TU261521 | lncRNA | downstream | 332090 | 5454596 ~ 5454923 (-) | True | G220858 |
| TU261494 | lncRNA | downstream | 343311 | 5443492 ~ 5443702 (-) | True | G220834 |
| TU261757 | lncRNA | upstream | 73686 | 5870401 ~ 5870627 (-) | True | G221068 |
| TU261950 | lncRNA | upstream | 295198 | 6091913 ~ 6092434 (-) | True | G221214 |
| TU261982 | lncRNA | upstream | 406349 | 6203064 ~ 6204930 (-) | True | G221245 |
| TU262213 | lncRNA | upstream | 529376 | 6326091 ~ 6416808 (-) | True | G221450 |
| TU262227 | lncRNA | upstream | 620167 | 6416882 ~ 6417625 (-) | True | G221461 |
| XM_034310516.1 | mRNA | downstream | 14493 | 5768627 ~ 5772520 (-) | True | proca1 |
| XM_026924672.2 | mRNA | downstream | 14504 | 5768627 ~ 5772509 (-) | False | proca1 |
| XM_026924970.2 | mRNA | downstream | 43592 | 5732735 ~ 5743421 (-) | True | ywhag2 |
| XM_026924516.1 | mRNA | downstream | 164542 | 5621506 ~ 5622471 (-) | True | LOC113532847 |
| XM_026924552.2 | mRNA | downstream | 177998 | 5606704 ~ 5609015 (-) | True | diabloa |
| XM_026924051.2 | mRNA | upstream | 1213 | 5797928 ~ 5803973 (-) | True | LOC113532612 |
| XM_034310538.1 | mRNA | upstream | 142337 | 5939052 ~ 5975719 (-) | True | synrg |
| XM_026924653.2 | mRNA | upstream | 192703 | 5989418 ~ 6003349 (-) | True | hnf1ba |
| XM_026923900.2 | mRNA | upstream | 224430 | 6021145 ~ 6024353 (-) | True | dynll2a |
| XM_026924598.2 | mRNA | upstream | 228748 | 6025463 ~ 6028603 (-) | True | srsf1a |
| TU261666 | other | downstream | 76122 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU260468 | other | downstream | 1970226 | 3740282 ~ 3816787 (-) | False | LOC113544484 |
| TU260466 | other | downstream | 1970226 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260467 | other | downstream | 1970226 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| TU260177 | other | downstream | 2875848 | 2907326 ~ 2911165 (-) | False | G219651 |
| TU261738 | other | upstream | 1270 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261846 | other | upstream | 224505 | 6021220 ~ 6024311 (-) | False | dynll2a |
| trnap-cgg_8 | other | upstream | 1398808 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 1595700 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| TU263800 | other | upstream | 3144303 | 8941018 ~ 8946899 (-) | True | G222809 |
