Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026934913.2 |
| length | 1087 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | hspb6 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 17429752 ~ 17432316 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006950 | response to stress | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU269561 | lncRNA | downstream | 22527 | 17405948 ~ 17407225 (-) | True | G227755 |
| TU269426 | lncRNA | downstream | 122028 | 17286343 ~ 17307724 (-) | True | G227640 |
| XR_004579543.1 | lncRNA | downstream | 124390 | 17302063 ~ 17305362 (-) | True | LOC117599113 |
| TU269401 | lncRNA | downstream | 189824 | 17239127 ~ 17239928 (-) | False | LOC113539242 |
| TU269369 | lncRNA | downstream | 266167 | 17161511 ~ 17163585 (-) | True | G227589 |
| TU269582 | lncRNA | upstream | 1739 | 17434055 ~ 17438586 (-) | False | psenen |
| TU269583 | lncRNA | upstream | 1739 | 17434055 ~ 17438586 (-) | True | psenen |
| TU269607 | lncRNA | upstream | 54315 | 17486631 ~ 17489432 (-) | False | G227786 |
| TU269609 | lncRNA | upstream | 54315 | 17486631 ~ 17489432 (-) | True | G227786 |
| TU270036 | lncRNA | upstream | 642280 | 18074596 ~ 18074799 (-) | True | G228131 |
| XM_026934910.2 | mRNA | downstream | 9291 | 17414024 ~ 17420461 (-) | False | lin37 |
| XM_026934911.2 | mRNA | downstream | 9301 | 17414024 ~ 17420451 (-) | False | lin37 |
| XM_026934912.2 | mRNA | downstream | 9520 | 17414024 ~ 17420232 (-) | True | lin37 |
| XM_034310935.1 | mRNA | downstream | 91858 | 17328119 ~ 17337894 (-) | True | LOC113539361 |
| XM_026934640.2 | mRNA | downstream | 102953 | 17317354 ~ 17326799 (-) | False | LOC113539084 |
| XM_026934584.2 | mRNA | upstream | 2601 | 17434917 ~ 17438614 (-) | False | psenen |
| XM_026934585.2 | mRNA | upstream | 2601 | 17434917 ~ 17438470 (-) | False | psenen |
| XM_026935078.2 | mRNA | upstream | 85691 | 17518007 ~ 17568547 (-) | True | gabbr1a |
| XM_026935080.2 | mRNA | upstream | 85691 | 17518007 ~ 17562515 (-) | False | gabbr1a |
| XM_026934965.2 | mRNA | upstream | 138212 | 17570528 ~ 17580546 (-) | True | sh3bp5la |
| TU268927 | other | downstream | 1065448 | 16363381 ~ 16364304 (-) | False | si:dkey-118k5.3 |
| TU268923 | other | downstream | 1112407 | 16316651 ~ 16317345 (-) | True | G227205 |
| TU268676 | other | downstream | 1264716 | 16119297 ~ 16165036 (-) | False | G226991 |
| TU268481 | other | downstream | 1584969 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU267049 | other | downstream | 4060902 | 13367763 ~ 13368850 (-) | True | G225622 |
| XR_003403925.1 | other | upstream | 1782443 | 19214759 ~ 19214923 (-) | True | LOC113539409 |
| TU270720 | other | upstream | 2275999 | 19708315 ~ 19708841 (-) | True | G228758 |
| trnae-cuc_28 | other | upstream | 3918927 | 21351243 ~ 21351314 (-) | True | trnae-cuc_28 |
| XR_004579494.1 | other | upstream | 4318819 | 21751135 ~ 21811084 (-) | True | gdpd5b |
| XR_004579495.1 | other | upstream | 4318819 | 21751135 ~ 21811083 (-) | False | gdpd5b |
