Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034310934.1 |
| length | 1000 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 6 |
| gene id | LOC113539358 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 17275928 ~ 17282313 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU269401 | lncRNA | downstream | 37794 | 17239127 ~ 17239928 (-) | False | LOC113539242 |
| TU269369 | lncRNA | downstream | 114137 | 17161511 ~ 17163585 (-) | True | G227589 |
| TU269180 | lncRNA | downstream | 364562 | 16912959 ~ 16913160 (-) | True | G227440 |
| TU269142 | lncRNA | downstream | 502647 | 16774853 ~ 16775075 (-) | True | G227405 |
| XR_004579542.1 | lncRNA | downstream | 555531 | 16717250 ~ 16722191 (-) | False | LOC117599111 |
| TU269426 | lncRNA | upstream | 4030 | 17286343 ~ 17307724 (-) | True | G227640 |
| XR_004579543.1 | lncRNA | upstream | 19750 | 17302063 ~ 17305362 (-) | True | LOC117599113 |
| TU269561 | lncRNA | upstream | 123635 | 17405948 ~ 17407225 (-) | True | G227755 |
| TU269582 | lncRNA | upstream | 151742 | 17434055 ~ 17438586 (-) | False | psenen |
| TU269583 | lncRNA | upstream | 151742 | 17434055 ~ 17438586 (-) | True | psenen |
| XM_034310383.1 | mRNA | downstream | 2503 | 17262576 ~ 17275219 (-) | True | LOC113539359 |
| XM_026934908.2 | mRNA | downstream | 27568 | 17230756 ~ 17250154 (-) | False | LOC113539242 |
| XM_026934906.2 | mRNA | downstream | 27568 | 17230756 ~ 17250154 (-) | False | LOC113539242 |
| XM_026934905.2 | mRNA | downstream | 27568 | 17230756 ~ 17250154 (-) | True | LOC113539242 |
| XM_026934865.2 | mRNA | downstream | 121756 | 17146935 ~ 17155966 (-) | True | tmem106ba |
| XM_034310936.1 | mRNA | upstream | 16906 | 17299219 ~ 17299613 (-) | True | LOC117599112 |
| XM_026934640.2 | mRNA | upstream | 35041 | 17317354 ~ 17326799 (-) | False | LOC113539084 |
| XM_034310932.1 | mRNA | upstream | 38311 | 17320624 ~ 17326799 (-) | True | LOC113539084 |
| XM_034310935.1 | mRNA | upstream | 45806 | 17328119 ~ 17337894 (-) | True | LOC113539361 |
| XM_026934910.2 | mRNA | upstream | 131711 | 17414024 ~ 17420461 (-) | False | lin37 |
| TU268927 | other | downstream | 913418 | 16363381 ~ 16364304 (-) | False | si:dkey-118k5.3 |
| TU268923 | other | downstream | 960377 | 16316651 ~ 16317345 (-) | True | G227205 |
| TU268676 | other | downstream | 1112686 | 16119297 ~ 16165036 (-) | False | G226991 |
| TU268481 | other | downstream | 1432939 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU267049 | other | downstream | 3908872 | 13367763 ~ 13368850 (-) | True | G225622 |
| XR_003403925.1 | other | upstream | 1932446 | 19214759 ~ 19214923 (-) | True | LOC113539409 |
| TU270720 | other | upstream | 2426002 | 19708315 ~ 19708841 (-) | True | G228758 |
| trnae-cuc_28 | other | upstream | 4068930 | 21351243 ~ 21351314 (-) | True | trnae-cuc_28 |
| XR_004579494.1 | other | upstream | 4468822 | 21751135 ~ 21811084 (-) | True | gdpd5b |
| XR_004579495.1 | other | upstream | 4468822 | 21751135 ~ 21811083 (-) | False | gdpd5b |
