Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026943402.2 |
| length | 1250 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 6 |
| gene id | cldn15lb |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 1581397 ~ 1588455 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0035622 | intrahepatic bile duct development | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005923 | bicellular tight junction | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU259106 | lncRNA | downstream | 4186 | 1576881 ~ 1577211 (-) | True | G218695 |
| TU259081 | lncRNA | downstream | 13206 | 1546445 ~ 1568191 (-) | False | LOC113544681 |
| TU259076 | lncRNA | downstream | 13206 | 1567520 ~ 1568191 (-) | True | LOC113544681 |
| TU259077 | lncRNA | downstream | 13206 | 1567520 ~ 1568191 (-) | False | LOC113544681 |
| TU259078 | lncRNA | downstream | 13206 | 1567520 ~ 1568191 (-) | False | LOC113544681 |
| XR_004579506.1 | lncRNA | upstream | 14956 | 1603411 ~ 1616938 (-) | False | LOC117599072 |
| XR_004579505.1 | lncRNA | upstream | 14956 | 1603411 ~ 1616938 (-) | False | LOC117599072 |
| XR_004579504.1 | lncRNA | upstream | 14956 | 1603411 ~ 1616938 (-) | True | LOC117599072 |
| TU259131 | lncRNA | upstream | 36029 | 1624484 ~ 1682087 (-) | True | G218720 |
| TU259150 | lncRNA | upstream | 87309 | 1675764 ~ 1676214 (-) | True | G218734 |
| XM_034310664.1 | mRNA | downstream | 368 | 1560569 ~ 1581029 (-) | False | atg16l1 |
| XM_034310666.1 | mRNA | downstream | 883 | 1560569 ~ 1580514 (-) | False | atg16l1 |
| XM_034310663.1 | mRNA | downstream | 883 | 1560569 ~ 1580514 (-) | False | atg16l1 |
| XM_034310665.1 | mRNA | downstream | 883 | 1560569 ~ 1580514 (-) | True | atg16l1 |
| XM_034310765.1 | mRNA | downstream | 23093 | 1546943 ~ 1558304 (-) | True | sagb |
| XM_034310478.1 | mRNA | upstream | 4138 | 1592593 ~ 1597472 (-) | True | LOC113544557 |
| XM_034310479.1 | mRNA | upstream | 4623 | 1593078 ~ 1597472 (-) | False | LOC113544557 |
| XM_026943604.2 | mRNA | upstream | 94310 | 1682765 ~ 1690584 (-) | True | fzd4 |
| XM_026943282.2 | mRNA | upstream | 210225 | 1798680 ~ 1813081 (-) | True | pdgfd |
| XM_026943576.2 | mRNA | upstream | 335213 | 1923668 ~ 1946150 (-) | False | gucy1a2 |
| trnag-ucc_18 | other | downstream | 83986 | 1497340 ~ 1497411 (-) | True | trnag-ucc_18 |
| trnag-ucc_17 | other | downstream | 84291 | 1497036 ~ 1497106 (-) | False | trnag-ucc_17 |
| trnag-ucc_16 | other | downstream | 85564 | 1495762 ~ 1495833 (-) | True | trnag-ucc_16 |
| TU258580 | other | downstream | 426697 | 1154410 ~ 1154700 (-) | True | G218302 |
| TU258537 | other | downstream | 447379 | 1080288 ~ 1134018 (-) | True | G218265 |
| trnag-ucc_22 | other | upstream | 380957 | 1969412 ~ 1969483 (-) | True | trnag-ucc_22 |
| TU260071 | other | upstream | 1027771 | 2616226 ~ 2629866 (-) | False | gal3st2 |
| trnag-ucc_24 | other | upstream | 1090639 | 2679094 ~ 2679165 (-) | True | trnag-ucc_24 |
| trnaw-cca_13 | other | upstream | 1094951 | 2683406 ~ 2683477 (-) | True | trnaw-cca_13 |
| TU260166 | other | upstream | 1299452 | 2887907 ~ 2963350 (-) | True | G219642 |
