RNA id: XM_034310395.1


Basic Information

Item Value
RNA id XM_034310395.1
length 2305
RNA type mRNA
GC content 0.42
exon number 8
gene id drd2a
representative False

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 8729942 ~ 8772841 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

ATGAAGACAACACGATAGGGACACTGTTCCACTCATTAACAGCTTTTCATCTCTCTGCTGACAATCTGCTAGAGACATTTTCGAGCAACTGAAACTTGAGGAACTCAAGGACTTGGTTTGAATACATCAGTCTTACAAAGAAGGGCCTCTTCTTGGCCTCGGACCCTCACAGCTGATGGAAGTCTTGGAGGAGTATGCTTACAATGAAAGCTTCCTCAAAAATGGATTCAATGGCCTCAACACTACAGATGGAGGCAGAAGACATCAGTACAATTATTATGCCATGCTACTCACTCTGCTCATTTTCGTCATCGTCTTCGGAAACGTACTCGTGTGCATGGCTGTGTCAAGAGAGAAAGCTCTACAGACCACTACTAACTACCTGATCGTGAGCTTGGCTGTCGCTGACCTGCTGGTGGCGACTCTGGTTATGCCTTGGGTGGTATATCTTGAGgtggtGGGAGAATGGAGGTTTAGCACAATCCACTGTGACATCTTTGTCACTCTTGATGTTATGATGTGCACAGCAAGCATCCTTAATCTTTGTGCCATTAGCATTGATAGGTATACAGCAGTTGCCATGCCAATGTTGTATAATACACGCTACAGCTCCAAGAGGAGAGTCACAGTCATGATCTCAGTAGTGTGGATCCTGTCCTTTGCCATTTCATGCCCCCTGCTGTTTGGACTCAATAACACAGAGAGCCACAATGAAGCCATGTGTGTAATCGCGAACCCTGCCTTTGTAGTCTACTCGTCTGTTGTGTCCTTCTATGTACCCTTCATCATCACCCTGCTCGTATACGTGCAGATCTACGTAGTGCTGCGTAGACGGCGGAAACGTGTTAGCACAAAGCGCACGTACCCAAGCAGCAACATGGACATGGGTGCTTTGAAGAAATGCACTCACCCTGATGATGTGAAGCTGTGCACGGTCGCTGTGAAGTCCAATGGGAATTTCCCTGTTAATAACAAAAATGTTTTCATAAAGGAGGTGGcaaacaatgaaaatgaaagccAAATGGATGAAATCACAAACCTTAATCCTCCAAACCAGAGGACACTTCAGCAGACAGGTGAGAGTCAGCATGGGCTTCTGCTTGGTTCGAACCACAGTGAAATAGATACAGCACCCTCCGCTCCTGAGCTCAAGCCAACAAGGAACGGAAAGACCTACGACGCCTCCAAAATGGCTAAAGCATTTGAGACTCAGGTGTCTCCCAGTGGCAAAATGCAGACATCAATGAAGTCCATTAGCAAGCGCAAAATCTCTCagcagaaagagaagaaagctACTCAGATGTTGGCTATTGTGCTCGGTGTGTTCATTATATGCTGGCTGCCgttcttcatcacacacataaTGAATACGTACTGTCACGTCCCTGCAGAACTCTACACAGCTTTTACCTGGCTCGGTTACGTCAACAGCGCCGTGAACCCCATCATATACACCACCTTCAATATTGAATTCCGCAAGGCTTTTATTAAGATCCTGCACTGCTGAGAGTGGAATTATCCATAAGTGAAGACAAACACAGCTCATCCACATGTGGCCTACATAAAGCTCCTTCCTGAAGACTGTTTTAAAAGGGAGCTAAACTTGAAGGAGATTACTGGGAATGACACGGATGTACATATGAAGTTGAAGATGTATTATAAAAGCAAGCAATTCTCCCAGTGTCATCTCATGCAACAGTAAGACATTTCTGGATAATTCCTAAGGAGGTGTCATTCAGTATAAGCTTCACAGTATtacttttgtttattaattacacaataaaggTAAAGTAAACATCATTTAGATTATAATACTGCAGTCTTCATAGTGGTGGTAACATACAGCAGTGTAATATgcagcaacagtaagaaaattTTAATACACTAATGCAAGTGTTGATGCTCAGCTGACAAcaaattacatatatacatgtgtgtataaaagtaATATGCACAAGAacaaaaagtgctttttttgaaaataatattgAGGAAATATTGATCCTCATAAACATGGTGGTGCTGTGCATTTTGGTCTCAGCTATCACTATCAAGACGCATTCAATCACTGTAGCTTGATGATTGATGATTTGGTCTTTAGGGTCAAACTGATCCCATGAGAAATTTGTACTAAGTGCAATTTGGTTGGAGTTTGTTAAATTTCATATGAACGAAATCATAAGAAAAGGTACAAATGGTAACCATAACTCAAACTTTGGTGAATGGAGTGTGAGAGGAAAACACCACTCAAGATCATTAAACCAGTTTGCAAAAATTTTGTCACAAAATGACTGTGCAATTATAA

Function

GO:

id name namespace
GO:0007195 adenylate cyclase-inhibiting dopamine receptor signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004935 adrenergic receptor activity molecular_function
GO:0001591 dopamine neurotransmitter receptor activity, coupled via Gi/Go molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU263563 lncRNA downstream 181568 8544912 ~ 8548374 (-) True G222610
TU263542 lncRNA downstream 238658 8464576 ~ 8491284 (-) True G222591
TU263531 lncRNA downstream 323759 8404850 ~ 8406183 (-) False sorl1
TU263469 lncRNA downstream 487766 8241064 ~ 8242176 (-) True G222522
TU263325 lncRNA downstream 532735 8196805 ~ 8197207 (-) True G222391
TU263847 lncRNA upstream 264639 9037480 ~ 9043751 (-) True G222852
TU264411 lncRNA upstream 937593 9710434 ~ 9713059 (-) False LOC113532707
XR_004579474.1 lncRNA upstream 985317 9758158 ~ 9758966 (-) True LOC117599042
TU264417 lncRNA upstream 1029651 9802492 ~ 9806485 (-) True LOC117599044
TU264418 lncRNA upstream 1030103 9802944 ~ 9806485 (-) False LOC117599044
XM_026924683.2 mRNA downstream 82704 8645643 ~ 8647238 (-) True zgc:162608
XM_026923992.2 mRNA downstream 99788 8615437 ~ 8630154 (-) False laynb
XM_026923991.2 mRNA downstream 99791 8615437 ~ 8630151 (-) True laynb
XM_026923898.2 mRNA downstream 116518 8563170 ~ 8613424 (-) True sik2b
XM_026924084.2 mRNA downstream 217740 8502694 ~ 8512202 (-) True il4i1
XM_026924270.2 mRNA upstream 2305 8775146 ~ 8796028 (-) False scn3b
XM_026924269.2 mRNA upstream 2305 8775146 ~ 8796028 (-) False scn3b
XM_026924271.2 mRNA upstream 2305 8775146 ~ 8787058 (-) False scn3b
XM_026924268.2 mRNA upstream 2305 8775146 ~ 8787055 (-) True scn3b
XM_026924267.2 mRNA upstream 2305 8775146 ~ 8787053 (-) False scn3b
XR_004579456.1 other downstream 1266443 7392415 ~ 7463499 (-) True zgc:77784
trnap-cgg_8 other downstream 1534348 7195523 ~ 7195594 (-) True trnap-cgg_8
TU261846 other downstream 2705631 6021220 ~ 6024311 (-) False dynll2a
TU261738 other downstream 2926064 5797985 ~ 5803878 (-) False LOC113532612
TU261666 other downstream 3019051 5710098 ~ 5710891 (-) True G220990
TU263800 other upstream 168177 8941018 ~ 8946899 (-) True G222809
TU264952 other upstream 1535219 10308060 ~ 10312487 (-) False LOC113533081
XR_004579509.1 other upstream 4168069 12940910 ~ 13007559 (-) True nf1a
XR_004579489.1 other upstream 4297295 13070136 ~ 13080860 (-) True wsb1
TU267049 other upstream 4594922 13367763 ~ 13368850 (-) True G225622

Expression Profile