Item | Value |
---|---|
RNA id | XM_034310479.1 |
length | 1051 |
RNA type | mRNA |
GC content | 0.52 |
exon number | 9 |
gene id | LOC113544557 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047608.1 |
NCBI id | CM018554.1 |
chromosome length | 25848897 |
location | 1592593 ~ 1597472 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU259106 | lncRNA | downstream | 15867 | 1576881 ~ 1577211 (-) | True | G218695 |
TU259076 | lncRNA | downstream | 24887 | 1567520 ~ 1568191 (-) | True | LOC113544681 |
XR_004579506.1 | lncRNA | upstream | 5939 | 1603411 ~ 1616938 (-) | False | LOC117599072 |
XR_004579505.1 | lncRNA | upstream | 5939 | 1603411 ~ 1616938 (-) | False | LOC117599072 |
XR_004579504.1 | lncRNA | upstream | 5939 | 1603411 ~ 1616938 (-) | True | LOC117599072 |
TU259131 | lncRNA | upstream | 27012 | 1624484 ~ 1682087 (-) | True | G218720 |
TU259150 | lncRNA | upstream | 78292 | 1675764 ~ 1676214 (-) | True | G218734 |
XM_026943402.2 | mRNA | downstream | 4623 | 1581397 ~ 1588455 (-) | False | cldn15lb |
XM_026943403.2 | mRNA | downstream | 4698 | 1581397 ~ 1588380 (-) | False | cldn15lb |
XM_026943401.2 | mRNA | downstream | 6112 | 1581397 ~ 1586966 (-) | True | cldn15lb |
XM_034310664.1 | mRNA | downstream | 12049 | 1560569 ~ 1581029 (-) | False | atg16l1 |
XM_026943604.2 | mRNA | upstream | 85293 | 1682765 ~ 1690584 (-) | True | fzd4 |
XM_026943282.2 | mRNA | upstream | 201208 | 1798680 ~ 1813081 (-) | True | pdgfd |
XM_026943576.2 | mRNA | upstream | 326196 | 1923668 ~ 1946150 (-) | False | gucy1a2 |
XM_026943575.2 | mRNA | upstream | 326196 | 1923668 ~ 1946150 (-) | True | gucy1a2 |
XM_034310710.1 | mRNA | upstream | 328439 | 1925911 ~ 1946156 (-) | False | gucy1a2 |
trnag-ucc_18 | other | downstream | 95667 | 1497340 ~ 1497411 (-) | True | trnag-ucc_18 |
trnag-ucc_17 | other | downstream | 95972 | 1497036 ~ 1497106 (-) | False | trnag-ucc_17 |
trnag-ucc_16 | other | downstream | 97245 | 1495762 ~ 1495833 (-) | True | trnag-ucc_16 |
TU258580 | other | downstream | 438378 | 1154410 ~ 1154700 (-) | True | G218302 |
TU258537 | other | downstream | 459060 | 1080288 ~ 1134018 (-) | True | G218265 |
trnag-ucc_22 | other | upstream | 371940 | 1969412 ~ 1969483 (-) | True | trnag-ucc_22 |
TU260071 | other | upstream | 1018754 | 2616226 ~ 2629866 (-) | False | gal3st2 |
trnag-ucc_24 | other | upstream | 1081622 | 2679094 ~ 2679165 (-) | True | trnag-ucc_24 |
trnaw-cca_13 | other | upstream | 1085934 | 2683406 ~ 2683477 (-) | True | trnaw-cca_13 |
TU260166 | other | upstream | 1290435 | 2887907 ~ 2963350 (-) | True | G219642 |