Item | Value |
---|---|
RNA id | TCONS_00007948 |
length | 530 |
RNA type | processed_transcript |
GC content | 0.53 |
exon number | 3 |
gene id | XLOC_004159 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007122.7 |
NCBI id | CM002895.2 |
chromosome length | 45484837 |
location | 26228918 ~ 26362334 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003677 | DNA binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
id | description |
---|---|
ZDB-GENE-101005-1 | Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Orthologous to human FOXJ3 (forkhead box J3). |
ensembl_id | ENSDART00000160647 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00008798 | lncRNA | downstream | 756747 | 25475305 ~ 25476980 (-) | False | XLOC_004150 |
TCONS_00007926 | lncRNA | downstream | 756747 | 25475305 ~ 25476980 (-) | False | XLOC_004150 |
TCONS_00008797 | lncRNA | downstream | 757145 | 25475305 ~ 25476582 (-) | False | XLOC_004150 |
TCONS_00007924 | lncRNA | downstream | 820574 | 25412343 ~ 25413153 (-) | True | XLOC_004148 |
TCONS_00007921 | lncRNA | downstream | 824831 | 25368112 ~ 25408896 (-) | False | XLOC_004147 |
TCONS_00008799 | lncRNA | upstream | 381481 | 26619434 ~ 26666495 (-) | False | XLOC_004162 |
TCONS_00007965 | lncRNA | upstream | 1264252 | 27502205 ~ 27507973 (-) | False | XLOC_004167 |
TCONS_00007962 | lncRNA | upstream | 1264556 | 27502509 ~ 27503132 (-) | False | XLOC_004167 |
TCONS_00008800 | lncRNA | upstream | 1305625 | 27543578 ~ 27625465 (-) | False | XLOC_004169 |
TCONS_00007969 | lncRNA | upstream | 1354690 | 27592643 ~ 27625125 (-) | False | XLOC_004169 |
TCONS_00007944 | mRNA | downstream | 16217 | 26189703 ~ 26217510 (-) | False | XLOC_004158 |
TCONS_00007945 | mRNA | downstream | 26589 | 26191291 ~ 26207138 (-) | True | XLOC_004158 |
TCONS_00007942 | mRNA | downstream | 53013 | 25882617 ~ 26180714 (-) | False | XLOC_004157 |
TCONS_00007941 | mRNA | downstream | 193133 | 25882617 ~ 26040594 (-) | False | XLOC_004157 |
TCONS_00007939 | mRNA | downstream | 380515 | 25833219 ~ 25853212 (-) | True | XLOC_004156 |
TCONS_00007949 | mRNA | upstream | 132428 | 26370381 ~ 26375575 (-) | False | XLOC_004160 |
TCONS_00007951 | mRNA | upstream | 330539 | 26568492 ~ 26590401 (-) | False | XLOC_004161 |
TCONS_00007952 | mRNA | upstream | 330879 | 26568832 ~ 26576754 (-) | False | XLOC_004161 |
TCONS_00007953 | mRNA | upstream | 330894 | 26568847 ~ 26590429 (-) | False | XLOC_004161 |
TCONS_00007955 | mRNA | upstream | 381180 | 26619133 ~ 26666627 (-) | False | XLOC_004162 |
TCONS_00007943 | other | downstream | 53013 | 26020099 ~ 26180714 (-) | True | XLOC_004157 |
TCONS_00007940 | other | downstream | 302645 | 25857941 ~ 25931082 (-) | False | XLOC_004157 |
TCONS_00007931 | other | downstream | 563772 | 25669839 ~ 25669955 (-) | True | XLOC_004152 |
TCONS_00007928 | other | downstream | 701247 | 25528557 ~ 25532480 (-) | False | XLOC_004151 |
TCONS_00007927 | other | downstream | 757542 | 25476099 ~ 25476185 (-) | True | XLOC_004150 |
TCONS_00007950 | other | upstream | 136045 | 26373998 ~ 26375518 (-) | True | XLOC_004160 |
TCONS_00007954 | other | upstream | 331578 | 26569531 ~ 26577209 (-) | True | XLOC_004161 |
TCONS_00007960 | other | upstream | 510339 | 26748292 ~ 26748429 (-) | True | XLOC_004165 |
TCONS_00007963 | other | upstream | 1265064 | 27503017 ~ 27503132 (-) | False | XLOC_004167 |
TCONS_00007964 | other | upstream | 1265279 | 27503232 ~ 27503320 (-) | True | XLOC_004167 |