Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034310618.1 |
| length | 1033 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 6 |
| gene id | mrpl28 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 6527472 ~ 6532884 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU262210 | lncRNA | downstream | 12507 | 6513828 ~ 6514965 (-) | True | G221448 |
| TU262227 | lncRNA | downstream | 109847 | 6416882 ~ 6417625 (-) | True | G221461 |
| TU262213 | lncRNA | downstream | 110664 | 6326091 ~ 6416808 (-) | True | G221450 |
| TU261982 | lncRNA | downstream | 322542 | 6203064 ~ 6204930 (-) | True | G221245 |
| TU261950 | lncRNA | downstream | 435038 | 6091913 ~ 6092434 (-) | True | G221214 |
| TU262299 | lncRNA | upstream | 106159 | 6639043 ~ 6639829 (-) | False | LOC113532805 |
| TU262406 | lncRNA | upstream | 154705 | 6687589 ~ 6688311 (-) | True | G221618 |
| TU262435 | lncRNA | upstream | 226526 | 6759410 ~ 6759618 (-) | True | G221638 |
| TU262426 | lncRNA | upstream | 227772 | 6760656 ~ 6761787 (-) | True | G221633 |
| TU262458 | lncRNA | upstream | 273271 | 6806155 ~ 6806367 (-) | True | G221659 |
| XM_026924502.2 | mRNA | downstream | 13739 | 6511236 ~ 6513733 (-) | True | mos |
| XM_026924174.2 | mRNA | downstream | 38887 | 6447125 ~ 6488585 (-) | False | hip1 |
| XM_026924173.2 | mRNA | downstream | 38887 | 6447125 ~ 6488585 (-) | True | hip1 |
| XM_026924175.2 | mRNA | downstream | 49969 | 6447125 ~ 6477503 (-) | False | hip1 |
| XM_026924636.2 | mRNA | downstream | 133165 | 6386179 ~ 6394307 (-) | True | zgc:103681 |
| XM_026924405.2 | mRNA | upstream | 3164 | 6536048 ~ 6554451 (-) | True | cul5a |
| XM_034310614.1 | mRNA | upstream | 3164 | 6536048 ~ 6554214 (-) | False | cul5a |
| XM_034310615.1 | mRNA | upstream | 3164 | 6536048 ~ 6554084 (-) | False | cul5a |
| XM_026924891.2 | mRNA | upstream | 25648 | 6558532 ~ 6579961 (-) | True | itgae.2 |
| XM_026924070.2 | mRNA | upstream | 51079 | 6583963 ~ 6605064 (-) | True | LOC113532622 |
| TU261846 | other | downstream | 503161 | 6021220 ~ 6024311 (-) | False | dynll2a |
| TU261738 | other | downstream | 723594 | 5797985 ~ 5803878 (-) | False | LOC113532612 |
| TU261666 | other | downstream | 816581 | 5710098 ~ 5710891 (-) | True | G220990 |
| TU260466 | other | downstream | 2710685 | 3811560 ~ 3816787 (-) | False | LOC113544484 |
| trnap-cgg_8 | other | upstream | 662639 | 7195523 ~ 7195594 (-) | True | trnap-cgg_8 |
| XR_004579456.1 | other | upstream | 859531 | 7392415 ~ 7463499 (-) | True | zgc:77784 |
| TU263800 | other | upstream | 2408134 | 8941018 ~ 8946899 (-) | True | G222809 |
| TU264952 | other | upstream | 3775176 | 10308060 ~ 10312487 (-) | False | LOC113533081 |
| XR_004579509.1 | other | upstream | 6408026 | 12940910 ~ 13007559 (-) | True | nf1a |
