Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034310936.1 |
| length | 395 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 1 |
| gene id | LOC117599112 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 17299219 ~ 17299613 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU269401 | lncRNA | downstream | 59291 | 17239127 ~ 17239928 (-) | False | LOC113539242 |
| TU269369 | lncRNA | downstream | 135634 | 17161511 ~ 17163585 (-) | True | G227589 |
| TU269180 | lncRNA | downstream | 386059 | 16912959 ~ 16913160 (-) | True | G227440 |
| TU269142 | lncRNA | downstream | 524144 | 16774853 ~ 16775075 (-) | True | G227405 |
| XR_004579542.1 | lncRNA | downstream | 577028 | 16717250 ~ 16722191 (-) | False | LOC117599111 |
| XR_004579543.1 | lncRNA | upstream | 2450 | 17302063 ~ 17305362 (-) | True | LOC117599113 |
| TU269561 | lncRNA | upstream | 106335 | 17405948 ~ 17407225 (-) | True | G227755 |
| TU269582 | lncRNA | upstream | 134442 | 17434055 ~ 17438586 (-) | False | psenen |
| TU269583 | lncRNA | upstream | 134442 | 17434055 ~ 17438586 (-) | True | psenen |
| TU269607 | lncRNA | upstream | 187018 | 17486631 ~ 17489432 (-) | False | G227786 |
| XM_026935075.2 | mRNA | downstream | 16906 | 17275928 ~ 17282313 (-) | True | LOC113539358 |
| XM_034310934.1 | mRNA | downstream | 16906 | 17277722 ~ 17282313 (-) | False | LOC113539358 |
| XM_034310383.1 | mRNA | downstream | 24000 | 17262576 ~ 17275219 (-) | True | LOC113539359 |
| XM_026934908.2 | mRNA | downstream | 49065 | 17230756 ~ 17250154 (-) | False | LOC113539242 |
| XM_026934906.2 | mRNA | downstream | 49065 | 17230756 ~ 17250154 (-) | False | LOC113539242 |
| XM_026934640.2 | mRNA | upstream | 17741 | 17317354 ~ 17326799 (-) | False | LOC113539084 |
| XM_034310932.1 | mRNA | upstream | 21011 | 17320624 ~ 17326799 (-) | True | LOC113539084 |
| XM_034310935.1 | mRNA | upstream | 28506 | 17328119 ~ 17337894 (-) | True | LOC113539361 |
| XM_026934910.2 | mRNA | upstream | 114411 | 17414024 ~ 17420461 (-) | False | lin37 |
| XM_026934911.2 | mRNA | upstream | 114411 | 17414024 ~ 17420451 (-) | False | lin37 |
| TU268927 | other | downstream | 934915 | 16363381 ~ 16364304 (-) | False | si:dkey-118k5.3 |
| TU268923 | other | downstream | 981874 | 16316651 ~ 16317345 (-) | True | G227205 |
| TU268676 | other | downstream | 1134183 | 16119297 ~ 16165036 (-) | False | G226991 |
| TU268481 | other | downstream | 1454436 | 15812389 ~ 15844783 (-) | True | G226830 |
| TU267049 | other | downstream | 3930369 | 13367763 ~ 13368850 (-) | True | G225622 |
| XR_003403925.1 | other | upstream | 1915146 | 19214759 ~ 19214923 (-) | True | LOC113539409 |
| TU270720 | other | upstream | 2408702 | 19708315 ~ 19708841 (-) | True | G228758 |
| trnae-cuc_28 | other | upstream | 4051630 | 21351243 ~ 21351314 (-) | True | trnae-cuc_28 |
| XR_004579494.1 | other | upstream | 4451522 | 21751135 ~ 21811084 (-) | True | gdpd5b |
| XR_004579495.1 | other | upstream | 4451522 | 21751135 ~ 21811083 (-) | False | gdpd5b |
