Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00007956 |
| length | 891 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 6 |
| gene id | XLOC_004162 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 26619133 ~ 26666627 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005829 | cytosol | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-120813-3 | Predicted to enable calcium ion binding activity. Predicted to be active in cytosol. Is expressed in neuromast. Orthologous to human EFCC1 (EF-hand and coiled-coil domain containing 1). |
| ensembl_id | ENSDART00000188067 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008798 | lncRNA | downstream | 1185644 | 25475305 ~ 25476980 (-) | False | XLOC_004150 |
| TCONS_00007926 | lncRNA | downstream | 1185644 | 25475305 ~ 25476980 (-) | False | XLOC_004150 |
| TCONS_00008797 | lncRNA | downstream | 1186042 | 25475305 ~ 25476582 (-) | False | XLOC_004150 |
| TCONS_00007924 | lncRNA | downstream | 1249471 | 25412343 ~ 25413153 (-) | True | XLOC_004148 |
| TCONS_00007921 | lncRNA | downstream | 1253728 | 25368112 ~ 25408896 (-) | False | XLOC_004147 |
| TCONS_00007965 | lncRNA | upstream | 835704 | 27502205 ~ 27507973 (-) | False | XLOC_004167 |
| TCONS_00007962 | lncRNA | upstream | 836008 | 27502509 ~ 27503132 (-) | False | XLOC_004167 |
| TCONS_00008800 | lncRNA | upstream | 877077 | 27543578 ~ 27625465 (-) | False | XLOC_004169 |
| TCONS_00007969 | lncRNA | upstream | 926142 | 27592643 ~ 27625125 (-) | False | XLOC_004169 |
| TCONS_00008801 | lncRNA | upstream | 926142 | 27592643 ~ 27625455 (-) | True | XLOC_004169 |
| TCONS_00007953 | mRNA | downstream | 72195 | 26568847 ~ 26590429 (-) | False | XLOC_004161 |
| TCONS_00007951 | mRNA | downstream | 72223 | 26568492 ~ 26590401 (-) | False | XLOC_004161 |
| TCONS_00007952 | mRNA | downstream | 85870 | 26568832 ~ 26576754 (-) | False | XLOC_004161 |
| TCONS_00007949 | mRNA | downstream | 287049 | 26370381 ~ 26375575 (-) | False | XLOC_004160 |
| TCONS_00007947 | mRNA | downstream | 300330 | 26232146 ~ 26362294 (-) | False | XLOC_004159 |
| TCONS_00007957 | mRNA | upstream | 19481 | 26685982 ~ 26701611 (-) | True | XLOC_004163 |
| TCONS_00007958 | mRNA | upstream | 37680 | 26704181 ~ 27057572 (-) | False | XLOC_004164 |
| TCONS_00007959 | mRNA | upstream | 40761 | 26707262 ~ 26832685 (-) | True | XLOC_004164 |
| TCONS_00007961 | mRNA | upstream | 820083 | 27486584 ~ 27501027 (-) | True | XLOC_004166 |
| TCONS_00007966 | mRNA | upstream | 844776 | 27511277 ~ 27537661 (-) | False | XLOC_004168 |
| TCONS_00007954 | other | downstream | 85415 | 26569531 ~ 26577209 (-) | True | XLOC_004161 |
| TCONS_00007950 | other | downstream | 287106 | 26373998 ~ 26375518 (-) | True | XLOC_004160 |
| TCONS_00007948 | other | downstream | 424671 | 26233727 ~ 26237953 (-) | True | XLOC_004159 |
| TCONS_00007943 | other | downstream | 481910 | 26020099 ~ 26180714 (-) | True | XLOC_004157 |
| TCONS_00007940 | other | downstream | 731542 | 25857941 ~ 25931082 (-) | False | XLOC_004157 |
| TCONS_00007960 | other | upstream | 81791 | 26748292 ~ 26748429 (-) | True | XLOC_004165 |
| TCONS_00007963 | other | upstream | 836516 | 27503017 ~ 27503132 (-) | False | XLOC_004167 |
| TCONS_00007964 | other | upstream | 836731 | 27503232 ~ 27503320 (-) | True | XLOC_004167 |
| TCONS_00007974 | other | upstream | 1046963 | 27713464 ~ 27719269 (-) | True | XLOC_004171 |
| TCONS_00007992 | other | upstream | 1411647 | 28078148 ~ 28086924 (-) | False | XLOC_004178 |
