RNA id: TCONS_00007960


Basic Information

Item Value
RNA id TCONS_00007960
length 138
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_004165
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 26748292 ~ 26748429 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTCTGTAACCATGATGGTGTTTTGTAGTTGTGTAAAAGACACTGAGCACACTGCTCTGCTCCCACcaaactaagcagggctgcgcccggtcagtatctggatgggagaccacatgggaaagctaggatgttgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119354

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008799 lncRNA downstream 81797 26619434 ~ 26666495 (-) False XLOC_004162
TCONS_00008798 lncRNA downstream 1271312 25475305 ~ 25476980 (-) False XLOC_004150
TCONS_00007926 lncRNA downstream 1271312 25475305 ~ 25476980 (-) False XLOC_004150
TCONS_00008797 lncRNA downstream 1271710 25475305 ~ 25476582 (-) False XLOC_004150
TCONS_00007924 lncRNA downstream 1335139 25412343 ~ 25413153 (-) True XLOC_004148
TCONS_00007965 lncRNA upstream 753776 27502205 ~ 27507973 (-) False XLOC_004167
TCONS_00007962 lncRNA upstream 754080 27502509 ~ 27503132 (-) False XLOC_004167
TCONS_00008800 lncRNA upstream 795149 27543578 ~ 27625465 (-) False XLOC_004169
TCONS_00007969 lncRNA upstream 844214 27592643 ~ 27625125 (-) False XLOC_004169
TCONS_00008801 lncRNA upstream 844214 27592643 ~ 27625455 (-) True XLOC_004169
TCONS_00007957 mRNA downstream 46681 26685982 ~ 26701611 (-) True XLOC_004163
TCONS_00007955 mRNA downstream 81665 26619133 ~ 26666627 (-) False XLOC_004162
TCONS_00007956 mRNA downstream 81791 26662624 ~ 26666501 (-) True XLOC_004162
TCONS_00007953 mRNA downstream 157863 26568847 ~ 26590429 (-) False XLOC_004161
TCONS_00007951 mRNA downstream 157891 26568492 ~ 26590401 (-) False XLOC_004161
TCONS_00007961 mRNA upstream 738155 27486584 ~ 27501027 (-) True XLOC_004166
TCONS_00007966 mRNA upstream 762848 27511277 ~ 27537661 (-) False XLOC_004168
TCONS_00007967 mRNA upstream 771892 27520321 ~ 27537650 (-) False XLOC_004168
TCONS_00007968 mRNA upstream 773084 27521513 ~ 27537593 (-) True XLOC_004168
TCONS_00007970 mRNA upstream 896095 27644524 ~ 27702778 (-) False XLOC_004170
TCONS_00007954 other downstream 171083 26569531 ~ 26577209 (-) True XLOC_004161
TCONS_00007950 other downstream 372774 26373998 ~ 26375518 (-) True XLOC_004160
TCONS_00007948 other downstream 510339 26233727 ~ 26237953 (-) True XLOC_004159
TCONS_00007943 other downstream 567578 26020099 ~ 26180714 (-) True XLOC_004157
TCONS_00007940 other downstream 817210 25857941 ~ 25931082 (-) False XLOC_004157
TCONS_00007963 other upstream 754588 27503017 ~ 27503132 (-) False XLOC_004167
TCONS_00007964 other upstream 754803 27503232 ~ 27503320 (-) True XLOC_004167
TCONS_00007974 other upstream 965035 27713464 ~ 27719269 (-) True XLOC_004171
TCONS_00007992 other upstream 1329719 28078148 ~ 28086924 (-) False XLOC_004178
TCONS_00008006 other upstream 1842459 28590888 ~ 28595428 (-) True XLOC_004184