Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU297603 |
| length | 944 |
| RNA type | TUCP |
| GC content | 0.54 |
| exon number | 3 |
| gene id | LOC113530359 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 8620982 ~ 8627025 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579753.1 | lncRNA | upstream | 20887 | 8597737 ~ 8600118 (+) | True | LOC117599296 |
| TU297579 | lncRNA | upstream | 111358 | 8509434 ~ 8509647 (+) | True | G251424 |
| TU297572 | lncRNA | upstream | 137448 | 8483292 ~ 8483557 (+) | True | G251418 |
| TU297571 | lncRNA | upstream | 137784 | 8482988 ~ 8483221 (+) | True | G251417 |
| TU297554 | lncRNA | upstream | 159196 | 8403341 ~ 8461809 (+) | True | G251400 |
| TU297629 | lncRNA | downstream | 4073 | 8629935 ~ 8633785 (+) | True | G251463 |
| TU297627 | lncRNA | downstream | 25739 | 8651601 ~ 8672239 (+) | True | G251462 |
| TU297967 | lncRNA | downstream | 413333 | 9039195 ~ 9039398 (+) | True | G251747 |
| TU297980 | lncRNA | downstream | 448494 | 9074356 ~ 9074629 (+) | True | G251760 |
| TU298010 | lncRNA | downstream | 505089 | 9130951 ~ 9223205 (+) | True | G251783 |
| XM_026921082.2 | mRNA | upstream | 68612 | 8533132 ~ 8552393 (+) | True | arhgef19 |
| XM_026921083.2 | mRNA | upstream | 68612 | 8533954 ~ 8552393 (+) | False | arhgef19 |
| XM_026920299.2 | mRNA | upstream | 89334 | 8513140 ~ 8531671 (+) | True | ano11 |
| XM_026920813.2 | mRNA | upstream | 111829 | 8493582 ~ 8509176 (+) | True | plekhm2 |
| XM_026920111.2 | mRNA | upstream | 130198 | 8483668 ~ 8490807 (+) | True | ddost |
| XM_026920937.2 | mRNA | downstream | 331532 | 8957394 ~ 8959195 (+) | False | her9 |
| XM_026920936.2 | mRNA | downstream | 331533 | 8957395 ~ 8959195 (+) | True | her9 |
| XM_026920737.2 | mRNA | downstream | 380880 | 9006742 ~ 9021145 (+) | True | perm1 |
| XM_026921233.2 | mRNA | downstream | 442843 | 9068705 ~ 9107223 (+) | False | noc2l |
| XM_034312117.1 | mRNA | downstream | 443004 | 9068866 ~ 9107223 (+) | True | noc2l |
| TU297540 | other | upstream | 262905 | 8352789 ~ 8358100 (+) | False | spen |
| XR_004579705.1 | other | upstream | 283506 | 8312773 ~ 8337499 (+) | False | atp13a2 |
| XR_004579706.1 | other | upstream | 283506 | 8313817 ~ 8337499 (+) | False | atp13a2 |
| TU297455 | other | upstream | 380238 | 8240018 ~ 8240767 (+) | False | si:ch211-197l9.2 |
| XR_003403162.2 | other | upstream | 1354402 | 7261228 ~ 7266603 (+) | False | tardbpl |
| XR_004579736.1 | other | downstream | 1666744 | 10292606 ~ 10339205 (+) | False | kcnab2b |
| TU299368 | other | downstream | 2222989 | 10848851 ~ 10851345 (+) | False | b4galt3 |
| XR_004579720.1 | other | downstream | 2246167 | 10872029 ~ 10912533 (+) | False | atp2b3b |
| XR_003403205.1 | other | downstream | 2370747 | 10996609 ~ 10996743 (+) | True | LOC113530991 |
| TU299671 | other | downstream | 2605567 | 11231429 ~ 11237362 (+) | True | oard1 |
