Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU298028 |
| length | 667 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G251800 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 9403851 ~ 9406388 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU298026 | lncRNA | upstream | 2459 | 9358262 ~ 9401392 (+) | True | G251799 |
| TU298031 | lncRNA | upstream | 154588 | 9243314 ~ 9249263 (+) | True | G251803 |
| TU298029 | lncRNA | upstream | 165318 | 9233213 ~ 9238533 (+) | True | G251801 |
| TU298009 | lncRNA | upstream | 171934 | 9220942 ~ 9231917 (+) | True | G251782 |
| TU298010 | lncRNA | upstream | 180646 | 9130951 ~ 9223205 (+) | True | G251783 |
| XR_004579723.1 | lncRNA | downstream | 119 | 9406507 ~ 9407698 (+) | True | LOC117599255 |
| TU298189 | lncRNA | downstream | 32172 | 9438560 ~ 9438796 (+) | True | G251921 |
| TU298258 | lncRNA | downstream | 135741 | 9542129 ~ 9543640 (+) | True | G251988 |
| TU298391 | lncRNA | downstream | 248494 | 9654882 ~ 9656393 (+) | True | G252102 |
| TU298408 | lncRNA | downstream | 301707 | 9708095 ~ 9730055 (+) | True | G252116 |
| XM_026921233.2 | mRNA | upstream | 296628 | 9068705 ~ 9107223 (+) | False | noc2l |
| XM_034312117.1 | mRNA | upstream | 296628 | 9068866 ~ 9107223 (+) | True | noc2l |
| XM_026920737.2 | mRNA | upstream | 382706 | 9006742 ~ 9021145 (+) | True | perm1 |
| XM_026920937.2 | mRNA | upstream | 444656 | 8957394 ~ 8959195 (+) | False | her9 |
| XM_026921091.2 | mRNA | downstream | 5085 | 9411473 ~ 9417779 (+) | True | ca6 |
| XM_026921378.2 | mRNA | downstream | 63684 | 9470072 ~ 9489862 (+) | True | spsb1 |
| XM_026921022.2 | mRNA | downstream | 273214 | 9679602 ~ 9728769 (+) | True | phc2a |
| XM_034312059.1 | mRNA | downstream | 273219 | 9679607 ~ 9728769 (+) | False | phc2a |
| XM_026921023.2 | mRNA | downstream | 273219 | 9679607 ~ 9728769 (+) | False | phc2a |
| TU297603 | other | upstream | 777989 | 8621005 ~ 8625862 (+) | False | LOC113530359 |
| TU297540 | other | upstream | 1045751 | 8352789 ~ 8358100 (+) | False | spen |
| XR_004579705.1 | other | upstream | 1066352 | 8312773 ~ 8337499 (+) | False | atp13a2 |
| XR_004579706.1 | other | upstream | 1066352 | 8313817 ~ 8337499 (+) | False | atp13a2 |
| TU297455 | other | upstream | 1163084 | 8240018 ~ 8240767 (+) | False | si:ch211-197l9.2 |
| XR_004579736.1 | other | downstream | 886218 | 10292606 ~ 10339205 (+) | False | kcnab2b |
| TU299368 | other | downstream | 1442463 | 10848851 ~ 10851345 (+) | False | b4galt3 |
| XR_004579720.1 | other | downstream | 1465641 | 10872029 ~ 10912533 (+) | False | atp2b3b |
| XR_003403205.1 | other | downstream | 1590221 | 10996609 ~ 10996743 (+) | True | LOC113530991 |
| TU299671 | other | downstream | 1825041 | 11231429 ~ 11237362 (+) | True | oard1 |
