Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU299468 |
| length | 666 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G252969 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11005952 ~ 11006617 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299463 | lncRNA | downstream | 8516 | 10994816 ~ 10997436 (-) | True | G252967 |
| TU299464 | lncRNA | downstream | 8516 | 10994816 ~ 10997436 (-) | False | G252967 |
| TU299430 | lncRNA | downstream | 93487 | 10904886 ~ 10912465 (-) | True | G252944 |
| TU299404 | lncRNA | downstream | 139256 | 10866236 ~ 10866696 (-) | True | G252921 |
| TU299403 | lncRNA | downstream | 140252 | 10865360 ~ 10865700 (-) | True | G252920 |
| TU299471 | lncRNA | upstream | 3207 | 11009824 ~ 11015630 (-) | True | LOC113530950 |
| TU299474 | lncRNA | upstream | 15342 | 11021959 ~ 11023025 (-) | False | abhd6b |
| XR_003403192.2 | lncRNA | upstream | 31205 | 11037822 ~ 11038968 (-) | True | LOC113530895 |
| XR_003403161.2 | lncRNA | upstream | 82448 | 11089065 ~ 11091286 (-) | False | LOC113530615 |
| TU299537 | lncRNA | upstream | 82460 | 11089077 ~ 11090683 (-) | True | LOC113530615 |
| XM_026921186.2 | mRNA | downstream | 1356 | 10999100 ~ 11004596 (-) | False | dnase1l1 |
| XM_026921185.2 | mRNA | downstream | 2186 | 10999100 ~ 11003766 (-) | True | dnase1l1 |
| XM_034311886.1 | mRNA | downstream | 32177 | 10942875 ~ 10973775 (-) | True | flna |
| XM_034311887.1 | mRNA | downstream | 32178 | 10942875 ~ 10973774 (-) | False | flna |
| XM_026921244.2 | mRNA | downstream | 64700 | 10932106 ~ 10941252 (-) | True | emd |
| XM_034312181.1 | mRNA | upstream | 2846 | 11009463 ~ 11015666 (-) | False | LOC113530950 |
| XM_034312180.1 | mRNA | upstream | 7341 | 11013958 ~ 11015666 (-) | False | LOC113530950 |
| XM_026921370.2 | mRNA | upstream | 7341 | 11013958 ~ 11015663 (-) | False | LOC113530950 |
| XM_026920311.2 | mRNA | upstream | 10199 | 11016816 ~ 11019715 (-) | False | kctd6b |
| XM_026920310.2 | mRNA | upstream | 10199 | 11016816 ~ 11019715 (-) | True | kctd6b |
| TU299234 | other | downstream | 367234 | 10636523 ~ 10638718 (-) | False | sinup |
| XR_003403171.2 | other | downstream | 536418 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU298725 | other | downstream | 975959 | 10029492 ~ 10029993 (-) | True | G252373 |
| XR_003403155.2 | other | downstream | 2427352 | 8566656 ~ 8578600 (-) | False | ttll10 |
| TU296847 | other | downstream | 3496205 | 7476274 ~ 7509747 (-) | False | ctnnbip1 |
| TU299470 | other | upstream | 7347 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
| trnae-uuc_4 | other | upstream | 252426 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| trnan-guu_24 | other | upstream | 266713 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| TU299993 | other | upstream | 449404 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | upstream | 449404 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
