Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU299470 |
| length | 850 |
| RNA type | TUCP |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC113530950 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11009463 ~ 11015666 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299468 | lncRNA | downstream | 7347 | 11005952 ~ 11006617 (-) | True | G252969 |
| TU299463 | lncRNA | downstream | 16528 | 10994816 ~ 10997436 (-) | True | G252967 |
| TU299464 | lncRNA | downstream | 16528 | 10994816 ~ 10997436 (-) | False | G252967 |
| TU299430 | lncRNA | downstream | 101499 | 10904886 ~ 10912465 (-) | True | G252944 |
| TU299404 | lncRNA | downstream | 147268 | 10866236 ~ 10866696 (-) | True | G252921 |
| TU299474 | lncRNA | upstream | 6329 | 11021959 ~ 11023025 (-) | False | abhd6b |
| XR_003403192.2 | lncRNA | upstream | 22192 | 11037822 ~ 11038968 (-) | True | LOC113530895 |
| XR_003403161.2 | lncRNA | upstream | 73435 | 11089065 ~ 11091286 (-) | False | LOC113530615 |
| TU299537 | lncRNA | upstream | 73447 | 11089077 ~ 11090683 (-) | True | LOC113530615 |
| TU299539 | lncRNA | upstream | 73447 | 11089077 ~ 11091335 (-) | False | LOC113530615 |
| XM_026921186.2 | mRNA | downstream | 9368 | 10999100 ~ 11004596 (-) | False | dnase1l1 |
| XM_026921185.2 | mRNA | downstream | 10198 | 10999100 ~ 11003766 (-) | True | dnase1l1 |
| XM_034311886.1 | mRNA | downstream | 40189 | 10942875 ~ 10973775 (-) | True | flna |
| XM_034311887.1 | mRNA | downstream | 40190 | 10942875 ~ 10973774 (-) | False | flna |
| XM_026921244.2 | mRNA | downstream | 72712 | 10932106 ~ 10941252 (-) | True | emd |
| XM_026920311.2 | mRNA | upstream | 1186 | 11016816 ~ 11019715 (-) | False | kctd6b |
| XM_026920310.2 | mRNA | upstream | 1186 | 11016816 ~ 11019715 (-) | True | kctd6b |
| XM_034312050.1 | mRNA | upstream | 4901 | 11020531 ~ 11025009 (-) | True | abhd6b |
| XM_026921269.2 | mRNA | upstream | 14437 | 11030067 ~ 11039455 (-) | False | slmapb |
| XM_026921268.2 | mRNA | upstream | 14437 | 11030067 ~ 11039455 (-) | True | slmapb |
| TU299234 | other | downstream | 375246 | 10636523 ~ 10638718 (-) | False | sinup |
| XR_003403171.2 | other | downstream | 544430 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU298725 | other | downstream | 983971 | 10029492 ~ 10029993 (-) | True | G252373 |
| XR_003403155.2 | other | downstream | 2435364 | 8566656 ~ 8578600 (-) | False | ttll10 |
| TU296847 | other | downstream | 3504217 | 7476274 ~ 7509747 (-) | False | ctnnbip1 |
| trnae-uuc_4 | other | upstream | 243413 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| trnan-guu_24 | other | upstream | 257700 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| TU299993 | other | upstream | 440391 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | upstream | 440391 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
| TU300077 | other | upstream | 541257 | 11556887 ~ 11568530 (-) | False | avpr2ab |
