Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU299761 |
| length | 1023 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 3 |
| gene id | wu:fa11c10 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11392434 ~ 11415449 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299755 | lncRNA | upstream | 15814 | 11372995 ~ 11376620 (+) | True | G253212 |
| TU299753 | lncRNA | upstream | 20082 | 11370703 ~ 11372352 (+) | True | G253210 |
| TU299681 | lncRNA | upstream | 145572 | 11245898 ~ 11246862 (+) | True | G253151 |
| TU299682 | lncRNA | upstream | 146962 | 11244761 ~ 11245472 (+) | True | G253152 |
| TU299500 | lncRNA | upstream | 287907 | 11104139 ~ 11104527 (+) | True | G252996 |
| TU299791 | lncRNA | downstream | 47080 | 11461714 ~ 11462757 (+) | True | G253248 |
| TU299793 | lncRNA | downstream | 55417 | 11470051 ~ 11479369 (+) | False | zgc:103759 |
| TU299787 | lncRNA | downstream | 91824 | 11506458 ~ 11507627 (+) | False | arhgap4b |
| TU299813 | lncRNA | downstream | 179870 | 11594504 ~ 11633295 (+) | False | hsd17b10 |
| TU299869 | lncRNA | downstream | 314406 | 11729040 ~ 11729292 (+) | True | G253301 |
| XM_026920982.2 | mRNA | upstream | 22710 | 11344353 ~ 11369724 (+) | True | bcl2l1 |
| XM_026920983.2 | mRNA | upstream | 22710 | 11345536 ~ 11369724 (+) | False | bcl2l1 |
| XM_034312153.1 | mRNA | upstream | 22710 | 11345536 ~ 11369724 (+) | False | bcl2l1 |
| XM_026920980.2 | mRNA | upstream | 50908 | 11310969 ~ 11341526 (+) | True | arfgef2 |
| XM_026920082.2 | mRNA | downstream | 15204 | 11429838 ~ 11437645 (+) | True | nsfl1c |
| XM_026921241.2 | mRNA | downstream | 29760 | 11444394 ~ 11453985 (+) | True | trpc4apb |
| XM_026921373.2 | mRNA | downstream | 58661 | 11473295 ~ 11479376 (+) | True | zgc:103759 |
| XM_026920331.2 | mRNA | downstream | 68785 | 11483419 ~ 11507750 (+) | False | arhgap4b |
| XM_026920333.2 | mRNA | downstream | 68785 | 11483419 ~ 11503952 (+) | False | arhgap4b |
| trnaf-gaa_28 | other | upstream | 124751 | 11267611 ~ 11267683 (+) | True | trnaf-gaa_28 |
| trnah-gug_14 | other | upstream | 132516 | 11259847 ~ 11259918 (+) | True | trnah-gug_14 |
| TU299671 | other | upstream | 155072 | 11231429 ~ 11237362 (+) | True | oard1 |
| XR_003403205.1 | other | upstream | 395691 | 10996609 ~ 10996743 (+) | True | LOC113530991 |
| XR_004579720.1 | other | upstream | 479901 | 10872029 ~ 10912533 (+) | False | atp2b3b |
| TU299947 | other | downstream | 477516 | 11892150 ~ 11900364 (+) | False | G253367 |
| XR_003403157.2 | other | downstream | 698988 | 12113622 ~ 12121372 (+) | True | trim101 |
| TU300294 | other | downstream | 726853 | 12141487 ~ 12143527 (+) | False | ppdpfb |
| XR_004579730.1 | other | downstream | 952109 | 12366743 ~ 12384574 (+) | False | LOC113530266 |
| XR_003403145.2 | other | downstream | 1422417 | 12837051 ~ 12850995 (+) | False | rbbp8l |
