Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU299787 |
| length | 1170 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | arhgap4b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11483419 ~ 11507750 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299793 | lncRNA | upstream | 27089 | 11470051 ~ 11479369 (+) | False | zgc:103759 |
| TU299791 | lncRNA | upstream | 43701 | 11461714 ~ 11462757 (+) | True | G253248 |
| TU299761 | lncRNA | upstream | 91824 | 11392434 ~ 11414634 (+) | False | wu:fa11c10 |
| TU299755 | lncRNA | upstream | 129838 | 11372995 ~ 11376620 (+) | True | G253212 |
| TU299753 | lncRNA | upstream | 134106 | 11370703 ~ 11372352 (+) | True | G253210 |
| TU299813 | lncRNA | downstream | 86877 | 11594504 ~ 11633295 (+) | False | hsd17b10 |
| TU299869 | lncRNA | downstream | 221413 | 11729040 ~ 11729292 (+) | True | G253301 |
| TU299903 | lncRNA | downstream | 275281 | 11782908 ~ 11784064 (+) | True | G253329 |
| XR_004579731.1 | lncRNA | downstream | 289630 | 11797257 ~ 11799304 (+) | True | LOC117599271 |
| TU299904 | lncRNA | downstream | 290210 | 11797837 ~ 11799302 (+) | False | LOC117599271 |
| XM_026920333.2 | mRNA | upstream | 2506 | 11483419 ~ 11503952 (+) | False | arhgap4b |
| XM_026921373.2 | mRNA | upstream | 27082 | 11473295 ~ 11479376 (+) | True | zgc:103759 |
| XM_026921241.2 | mRNA | upstream | 52473 | 11444394 ~ 11453985 (+) | True | trpc4apb |
| XM_026920082.2 | mRNA | upstream | 68813 | 11429838 ~ 11437645 (+) | True | nsfl1c |
| XM_026921394.2 | mRNA | upstream | 96834 | 11392610 ~ 11409624 (+) | True | wu:fa11c10 |
| XM_034311970.1 | mRNA | downstream | 1875 | 11509502 ~ 11512493 (+) | True | zgc:158296 |
| XM_026920851.2 | mRNA | downstream | 8762 | 11516389 ~ 11528319 (+) | True | ikbkg |
| XM_034311966.1 | mRNA | downstream | 8762 | 11516389 ~ 11528319 (+) | False | ikbkg |
| XM_034311967.1 | mRNA | downstream | 8763 | 11516390 ~ 11528319 (+) | False | ikbkg |
| XM_034311968.1 | mRNA | downstream | 8764 | 11516391 ~ 11528319 (+) | False | ikbkg |
| XR_003403199.2 | other | upstream | 91009 | 11392592 ~ 11415449 (+) | False | wu:fa11c10 |
| XR_003403198.2 | other | upstream | 91009 | 11400036 ~ 11415449 (+) | False | wu:fa11c10 |
| trnaf-gaa_28 | other | upstream | 238775 | 11267611 ~ 11267683 (+) | True | trnaf-gaa_28 |
| trnah-gug_14 | other | upstream | 246540 | 11259847 ~ 11259918 (+) | True | trnah-gug_14 |
| TU299671 | other | upstream | 269096 | 11231429 ~ 11237362 (+) | True | oard1 |
| TU299947 | other | downstream | 384523 | 11892150 ~ 11900364 (+) | False | G253367 |
| XR_003403157.2 | other | downstream | 605995 | 12113622 ~ 12121372 (+) | True | trim101 |
| TU300294 | other | downstream | 633860 | 12141487 ~ 12143527 (+) | False | ppdpfb |
| XR_004579730.1 | other | downstream | 859116 | 12366743 ~ 12384574 (+) | False | LOC113530266 |
| XR_003403145.2 | other | downstream | 1329424 | 12837051 ~ 12850995 (+) | False | rbbp8l |
