Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU299971 |
| length | 716 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G253383 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11353502 ~ 11354217 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299705 | lncRNA | downstream | 88353 | 11264909 ~ 11265149 (-) | True | G253174 |
| TU299539 | lncRNA | downstream | 262167 | 11089077 ~ 11091335 (-) | False | LOC113530615 |
| XR_003403161.2 | lncRNA | downstream | 262216 | 11089065 ~ 11091286 (-) | False | LOC113530615 |
| TU299537 | lncRNA | downstream | 262819 | 11089077 ~ 11090683 (-) | True | LOC113530615 |
| XR_003403192.2 | lncRNA | downstream | 314534 | 11037822 ~ 11038968 (-) | True | LOC113530895 |
| TU299973 | lncRNA | upstream | 5298 | 11359515 ~ 11361585 (-) | True | G253385 |
| TU299972 | lncRNA | upstream | 8755 | 11362972 ~ 11364414 (-) | True | G253384 |
| XR_003403134.2 | lncRNA | upstream | 101803 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
| XR_003403133.2 | lncRNA | upstream | 101803 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
| TU300067 | lncRNA | upstream | 176487 | 11530704 ~ 11533297 (-) | True | G253444 |
| XM_026920309.2 | mRNA | downstream | 75826 | 11274090 ~ 11277676 (-) | False | fkbpl |
| XM_026920307.2 | mRNA | downstream | 76381 | 11274090 ~ 11277121 (-) | False | fkbpl |
| XM_026920306.2 | mRNA | downstream | 76383 | 11274090 ~ 11277119 (-) | True | fkbpl |
| XM_026920308.2 | mRNA | downstream | 76385 | 11274090 ~ 11277117 (-) | False | fkbpl |
| XM_034311599.1 | mRNA | downstream | 76385 | 11274090 ~ 11277117 (-) | False | fkbpl |
| XM_026921201.2 | mRNA | upstream | 18025 | 11372242 ~ 11376560 (-) | False | LOC113530844 |
| XM_026921202.2 | mRNA | upstream | 18025 | 11372242 ~ 11376409 (-) | True | LOC113530844 |
| XM_034311706.1 | mRNA | upstream | 83832 | 11438049 ~ 11444255 (-) | False | emp3b |
| XM_026921110.2 | mRNA | upstream | 83832 | 11438049 ~ 11443931 (-) | False | emp3b |
| XM_034311707.1 | mRNA | upstream | 83832 | 11438049 ~ 11443930 (-) | False | emp3b |
| trnan-guu_24 | other | downstream | 80099 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| trnae-uuc_4 | other | downstream | 94388 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| TU299470 | other | downstream | 337872 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
| TU299234 | other | downstream | 714784 | 10636523 ~ 10638718 (-) | False | sinup |
| XR_003403171.2 | other | downstream | 883968 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU299993 | other | upstream | 101804 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | upstream | 101804 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
| TU300077 | other | upstream | 202670 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| XR_003403206.1 | other | upstream | 538131 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| XR_003403207.1 | other | upstream | 538710 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
