Item | Value |
---|---|
RNA id | TU300066 |
length | 681 |
lncRNA type | inter_gene |
GC content | 0.42 |
exon number | 4 |
gene id | G253444 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047610.1 |
NCBI id | CM018556.1 |
chromosome length | 25111544 |
location | 11530704 ~ 11533297 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
XR_003403134.2 | lncRNA | downstream | 69743 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
XR_003403133.2 | lncRNA | downstream | 69743 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
TU299972 | lncRNA | downstream | 167860 | 11362972 ~ 11364414 (-) | True | G253384 |
TU299973 | lncRNA | downstream | 170689 | 11359515 ~ 11361585 (-) | True | G253385 |
TU299971 | lncRNA | downstream | 178057 | 11353502 ~ 11354217 (-) | True | G253383 |
TU300041 | lncRNA | upstream | 6884 | 11540181 ~ 11542479 (-) | True | G253430 |
TU300042 | lncRNA | upstream | 6884 | 11540181 ~ 11542479 (-) | False | G253430 |
TU300090 | lncRNA | upstream | 38128 | 11571425 ~ 11571624 (-) | True | G253463 |
TU300091 | lncRNA | upstream | 38523 | 11571820 ~ 11572019 (-) | True | G253464 |
TU300045 | lncRNA | upstream | 79943 | 11613240 ~ 11620395 (-) | True | G253433 |
XM_034311706.1 | mRNA | downstream | 88019 | 11438049 ~ 11444255 (-) | False | emp3b |
XM_026921110.2 | mRNA | downstream | 88343 | 11438049 ~ 11443931 (-) | False | emp3b |
XM_034311707.1 | mRNA | downstream | 88344 | 11438049 ~ 11443930 (-) | False | emp3b |
XM_034311705.1 | mRNA | downstream | 88346 | 11438049 ~ 11443928 (-) | False | emp3b |
XM_026921109.2 | mRNA | downstream | 89831 | 11438049 ~ 11442443 (-) | True | emp3b |
XM_026920457.2 | mRNA | upstream | 16097 | 11549394 ~ 11568603 (-) | False | avpr2ab |
XM_026920456.2 | mRNA | upstream | 16097 | 11549394 ~ 11568602 (-) | True | avpr2ab |
XM_026921204.2 | mRNA | upstream | 54408 | 11587705 ~ 11598386 (-) | True | LOC113530846 |
XM_034312010.1 | mRNA | upstream | 184532 | 11717829 ~ 11725337 (-) | False | LOC113530831 |
XM_026921182.2 | mRNA | upstream | 184532 | 11717829 ~ 11725337 (-) | False | LOC113530831 |
TU299993 | other | downstream | 69568 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
TU299994 | other | downstream | 69568 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
trnan-guu_24 | other | downstream | 258871 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
trnae-uuc_4 | other | downstream | 273160 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
TU299470 | other | downstream | 516644 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
TU300077 | other | upstream | 23590 | 11556887 ~ 11568530 (-) | False | avpr2ab |
XR_003403206.1 | other | upstream | 359051 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
XR_003403207.1 | other | upstream | 359630 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
trnae-cuc_33 | other | upstream | 607805 | 12141102 ~ 12141173 (-) | True | trnae-cuc_33 |
TU300417 | other | upstream | 625475 | 12158772 ~ 12159360 (-) | False | ptk6b |