Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU300091 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G253464 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11571820 ~ 11572019 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU300090 | lncRNA | downstream | 196 | 11571425 ~ 11571624 (-) | True | G253463 |
| TU300041 | lncRNA | downstream | 29341 | 11540181 ~ 11542479 (-) | True | G253430 |
| TU300042 | lncRNA | downstream | 29341 | 11540181 ~ 11542479 (-) | False | G253430 |
| TU300067 | lncRNA | downstream | 38523 | 11530704 ~ 11533297 (-) | True | G253444 |
| TU300066 | lncRNA | downstream | 38523 | 11532274 ~ 11533297 (-) | False | G253444 |
| TU300045 | lncRNA | upstream | 41221 | 11613240 ~ 11620395 (-) | True | G253433 |
| TU300125 | lncRNA | upstream | 140978 | 11712997 ~ 11714176 (-) | False | G253494 |
| TU300126 | lncRNA | upstream | 140978 | 11712997 ~ 11713787 (-) | False | G253494 |
| TU300122 | lncRNA | upstream | 141158 | 11713177 ~ 11714753 (-) | True | G253494 |
| TU300131 | lncRNA | upstream | 171931 | 11743950 ~ 11744158 (-) | True | G253499 |
| XM_026920457.2 | mRNA | downstream | 3217 | 11549394 ~ 11568603 (-) | False | avpr2ab |
| XM_026920456.2 | mRNA | downstream | 3218 | 11549394 ~ 11568602 (-) | True | avpr2ab |
| XM_026921110.2 | mRNA | downstream | 127889 | 11438049 ~ 11443931 (-) | False | emp3b |
| XM_026921204.2 | mRNA | upstream | 15686 | 11587705 ~ 11598386 (-) | True | LOC113530846 |
| XM_034312010.1 | mRNA | upstream | 145810 | 11717829 ~ 11725337 (-) | False | LOC113530831 |
| XM_026921182.2 | mRNA | upstream | 145810 | 11717829 ~ 11725337 (-) | False | LOC113530831 |
| XM_026921183.2 | mRNA | upstream | 145810 | 11717829 ~ 11725337 (-) | True | LOC113530831 |
| XM_026920993.2 | mRNA | upstream | 156982 | 11729001 ~ 11741759 (-) | False | uba3 |
| TU300077 | other | downstream | 3290 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| TU299993 | other | downstream | 109114 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | downstream | 109114 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
| trnan-guu_24 | other | downstream | 298417 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| trnae-uuc_4 | other | downstream | 312706 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| XR_003403206.1 | other | upstream | 320329 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| XR_003403207.1 | other | upstream | 320908 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
| trnae-cuc_33 | other | upstream | 569083 | 12141102 ~ 12141173 (-) | True | trnae-cuc_33 |
| TU300417 | other | upstream | 586753 | 12158772 ~ 12159360 (-) | False | ptk6b |
| XR_004579685.1 | other | upstream | 2557197 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
